WormBase Tree Display for Gene: WBGene00185079
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| WBGene00185079 | SMap | S_parent | Sequence | W10D9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | gvd-1 | Author_evidence | WBPerson2530 | |||||
| Sequence_name | W10D9.6 | ||||||||
| Molecular_name | W10D9.6a | ||||||||
| W10D9.6a.1 | |||||||||
| CE43588 | |||||||||
| W10D9.6b | |||||||||
| CE51097 | |||||||||
| W10D9.6b.1 | |||||||||
| Other_name | CELE_W10D9.6 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | gvd-1 | ||||||||
| DB_info | Database | WormFlux | gene | WBGene00185079 | |||||
| NDB | locus_tag | CELE_W10D9.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00185079|UniProtKB=C0Z1Y2 | |||||||
| family | PTHR33963 | ||||||||
| NCBI | gene | 13183306 | |||||||
| RefSeq | protein | NM_001267083.3 | |||||||
| NM_001316874.4 | |||||||||
| TrEMBL | UniProtAcc | C0Z1Y2 | |||||||
| A0A0M7REA1 | |||||||||
| UniProt_GCRP | UniProtAcc | C0Z1Y2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 13 Mar 2009 13:55:58 | WBPerson1867 | Event | Split_from | WBGene00021131 | ||
| 2 | 10 Jul 2023 23:47:10 | WBPerson51134 | Name_change | CGC_name | gvd-1 | ||||
| Split_from | WBGene00021131 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gvd | ||||||||
| Allele (47) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP2028 | ||||||||
| CEOP2686 | |||||||||
| Ortholog | WBGene00029237 | Caenorhabditis briggsae | From_analysis | Inparanoid_8 | |||||
| WBGene00064188 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||||
| WormBase-Compara | |||||||||
| WBGene00153069 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | ||||||
| WormBase-Compara | |||||||||
| WBGene00184834 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | ||||||
| CSP38.g8552 | Caenorhabditis quiockensis | From_analysis | WormBase-Compara | ||||||
| CSP40.g22614 | Caenorhabditis tribulationis | From_analysis | WormBase-Compara | ||||||
| GCK72_007982 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
| Sp34_20000210 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | ||||||
| chrII_pilon.g3116 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog | WBGene00021131 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in germ line based on RNA-seq studies. Is affected by several genes including daf-16; skn-1; and clk-1 based on RNA-seq and microarray studies. Is affected by seven chemicals including rotenone; Zidovudine; and Rifampin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | W10D9.6a | |||||||
| W10D9.6b | |||||||||
| Corresponding_transcript | W10D9.6a.1 | ||||||||
| W10D9.6b.1 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00055088 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1016249 | ||||||||
| Expr1040440 | |||||||||
| Expr1158628 | |||||||||
| Expr2006911 | |||||||||
| Expr2025138 | |||||||||
| Drives_construct | WBCnstr00042786 | ||||||||
| Construct_product | WBCnstr00042786 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (59) | |||||||||
| Interaction | WBInteraction000517041 | ||||||||
| WBInteraction000517056 | |||||||||
| WBInteraction000517064 | |||||||||
| Map_info | Positive | Positive_clone | W10D9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -15.6095 | |||||||
| Method | Gene |
