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WormBase Tree Display for Gene: WBGene00190364

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Name Class

WBGene00190364SMapS_parentSequenceCbre_Contig723
IdentityVersion1
NameSequence_nameCBN28399
Molecular_nameCBN28399
CBN28399.1
CN34438
Public_nameCBN28399
SpeciesCaenorhabditis brenneri
HistoryVersion_change120 May 2009 11:55:52WBPerson1847EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:0000002 (11)
WBls:000000411.7229From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
5.86145From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
WBls:000002410.5138From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
11.078From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
27.7314From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
33.7723From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
7.01472From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
WBls:000003829.3227From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
32.8071From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
36.2915From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
WBls:0000041 (17)
WBls:00001014.93396From_analysisRNASeq.brenneri.total_over_all_stages.control_median
8.42066From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
GO_annotation00225968
00225969
Ortholog (31)
ParalogWBGene00159743Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
WBGene00139135Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00146762Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00149585Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00175048Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionPredicted to enable pyridoxal phosphate binding activity and transaminase activity. Is an ortholog of C. elegans T09B4.8.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN28399
Corresponding_transcriptCBN28399.1
Other_sequenceDviv_isotig13677
Tcol_isotig12613
GP01919
Hbac_isotig07559
Oden_isotig01396
CJC16073_1
Dviv_isotig13675
Dviv_isotig13676
JK315528.1
Experimental_infoMicroarray_resultsGPL14142_CBN28399_932-991_0.933_8_B
GPL14142_CBN28399_1017-1076_0.882_47_C
GPL14142_CBN28399_1028-1087_0.943_4_A
MethodGene