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WormBase Tree Display for Gene: WBGene00190677

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Name Class

WBGene00190677SMapS_parentSequenceCbre_Contig18
IdentityVersion2
NameCGC_nameCbn-unc-94From_analysisInferred_from_orthology
Sequence_nameCBN28712
Molecular_nameCBN28712
CBN28712.1
CN38298
Public_nameCbn-unc-94
SpeciesCaenorhabditis brenneri
HistoryVersion_change120 May 2009 11:55:52WBPerson1847EventCreated
220 Mar 2018 10:26:11WBPerson4025Name_changeCGC_nameCbn-unc-94
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:000000215.1145From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
24.1389From_analysisRNASeq.brenneri.WBls:0000002.control_mean
24.2721From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
25.9297From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
27.7998From_analysisRNASeq.brenneri.WBls:0000002.control_median
29.6699From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
31.7124From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
34.3188From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
35.8983From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
44.4736From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
WBls:000000415.4129From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
30.8259From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
WBls:00000240From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
23.0466From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
29.5646From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
45.1083From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
47.1362From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
48.0884From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
WBls:000003821.1023From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
22.5437From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
23.9851From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
WBls:000004110.1441From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100780
10.6868From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100777
10.7899From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100778
12.6665From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100774
17.6694From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX103654
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191965
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX103657
21.1747From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100773
21.2055From_analysisRNASeq.brenneri.WBls:0000041.control_mean
21.6742From_analysisRNASeq.brenneri.WBls:0000041.control_median
22.1736From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100779
22.2463From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100775
28.7088From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100776
31.4261From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191968
33.7246From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191970
37.1905From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
38.8278From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191967
41.8586From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191966
WBls:000010121.1803From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
22.2463From_analysisRNASeq.brenneri.total_over_all_stages.control_median
GO_annotation00226327
00226328
OrthologWBGene00006823Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00026685Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00057156Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00101513Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
WBGene00127368Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
CBOVI.g12163Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g15256Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g22163Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g21534Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g2072Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g8198Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g341Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g22152Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g17601Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g2831Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g4895Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cni-unc-94Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold591.g5135Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_03527.g30475Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_20157Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_000837Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g12066Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g15034Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_10288200Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00222257Brugia malayiFrom_analysisWormBase-Compara
chrI_pilon.g1042Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00238330Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00242738Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00260452Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00293893Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00143145Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00193780Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00193447Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionPredicted to enable tropomyosin binding activity. Predicted to be involved in pointed-end actin filament capping. Is an ortholog of C. elegans unc-94. In C. elegans, unc-94 is involved in several processes, including myofibril assembly; nematode larval development; and pointed-end actin filament capping.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN28712
Corresponding_CDS_historyCBN28712:np231
Corresponding_transcriptCBN28712.1
Other_sequenceCBC03264_1
SR02639
AE04229
Hbac_isotig06100
FC810383.1
Dviv_isotig08411
EY459533.1
Tcir_isotig30338
EY468196.1
FC543056.1
ACC16671_1
Acan_isotig00064
EX547755.1
FC819966.1
MH02411
PPC01693_1
Oden_isotig18803
CR02325
CRC02308_1
HC08863
BXC04524_1
AYC04548_1
EY467433.1
Tcol_isotig12977
Tcir_isotig10401
Dviv_isotig08413
JI168347.1
SRC03147_1
MHC01936_1
ACC09668_1
HCC11406_1
FC815783.1
Experimental_infoMicroarray_resultsGPL14142_CBN28712_342-401_0.763_52_C
GPL14142_CBN28712_628-687_0.868_7_B
GPL14142_CBN28712_997-1056_0.817_30_A
MethodGene