WormBase Tree Display for Gene: WBGene00191924

WBGene00191924 SMap: S_parent: Sequence: Cbre_Contig20
  Identity: Version: 2
    Name: CGC_name: Cbn-xrn-2 From_analysis: Inferred_from_orthology
      Sequence_name: CBN29959
      Molecular_name: CBN29959
        CBN29959.1
        CN34867
      Public_name: Cbn-xrn-2
    Species: Caenorhabditis brenneri
    History: Version_change: 1 20 May 2009 11:55:53 WBPerson1847 Event: Created
        2 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Cbn-xrn-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: xrn
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        42.3745 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        84.7491 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
      WBls:0000024 11.0065 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        13.3032 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        17.3415 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        40.5511 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        44.8312 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
      WBls:0000038 18.3619 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
        18.5682 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        18.7745 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
      WBls:0000041 (17)
      WBls:0000101 17.1427 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
        9.22024 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
    GO_annotation: 00227691
      00227692
      00227693
      00227694
      00227695
    Ortholog (35)
    Paralog: WBGene00160259 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00190726 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to enable 5'-3' RNA exonuclease activity and nucleic acid binding activity. Predicted to be involved in nucleobase-containing compound metabolic process. Predicted to be located in nucleus. Is an ortholog of C. elegans xrn-2. In C. elegans, xrn-2 is involved in several processes, including miRNA catabolic process; negative regulation of miRNA-mediated gene silencing; and regulation of vulval development. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN29959
    Corresponding_transcript: CBN29959.1
    Other_sequence (39)
  Experimental_info: Microarray_results: GPL14142_CBN29959_316-375_0.804_82_B
      GPL14142_CBN29959_1021-1080_0.773_133_C
      GPL14142_CBN29959_1181-1240_0.828_54_A
  Method: Gene