WormBase Tree Display for Gene: WBGene00192403

WBGene00192403 SMap: S_parent: Sequence: Cbre_Contig20
  Identity: Version: 4
    Name: CGC_name: Cbn-rpoa-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBN30438
      Molecular_name: CBN30438
        CBN30438.1
        CN33716
      Other_name: Cbn-rpoa-1.1 From_analysis: Inferred_from_orthology
      Public_name: Cbn-rpoa-1
    Species: Caenorhabditis brenneri
    History: Version_change: 1 20 May 2009 11:55:53 WBPerson1847 Event: Created
        2 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Cbn-rpoa-1
        3 01 Oct 2019 10:47:49 WBPerson1983 Name_change: CGC_name: Cbn-rpoa-1.1
                Other_name: Cbn-rpoa-1
        4 27 Nov 2019 12:48:14 WBPerson1983 Name_change: CGC_name: Cbn-rpoa-1
                Other_name: Cbn-rpoa-1.1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rpoa
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 17.915 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        8.9575 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
      WBls:0000024 19.0286 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        20.0126 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        25.751 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        30.7913 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        32.8044 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
      WBls:0000038 13.4641 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        13.6198 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        13.7755 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 (17)
      WBls:0000101 6.45235 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        9.01947 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00228217
      00228218
      00228219
    Ortholog (39)
    Paralog: WBGene00192532 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00190353 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00194515 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to enable DNA binding activity and DNA-directed 5'-3' RNA polymerase activity. Predicted to be involved in DNA-templated transcription. Is an ortholog of C. elegans rpoa-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN30438
    Corresponding_transcript: CBN30438.1
    Other_sequence (71)
  Experimental_info: Microarray_results: GPL14142_CBN30438_905-964_0.794_155_B
      GPL14142_CBN30438_2733-2792_0.571_895_C
      GPL14142_CBN30438_3192-3251_0.804_111_A
  Method: Gene