WormBase Tree Display for Gene: WBGene00193028

WBGene00193028 SMap: S_parent: Sequence: Cbre_Contig2
  Identity: Version: 2
    Name: CGC_name: Cbn-hex-5 From_analysis: Inferred_from_orthology
      Sequence_name: CBN31063
      Molecular_name: CBN31063
        CBN31063.1
        CN32394
      Public_name: Cbn-hex-5
    Species: Caenorhabditis brenneri
    History: Version_change: 1 20 May 2009 11:55:53 WBPerson1847 Event: Created
        2 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Cbn-hex-5
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: hex
    RNASeq_FPKM: WBls:0000002 1.00372 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
        1.04513 From_analysis: RNASeq.brenneri.WBls:0000002.control_mean
        1.25005 From_analysis: RNASeq.brenneri.WBls:0000002.control_median
        1.49639 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
        1.50936 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
        1.61853 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
        1.79307 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
        3.03019 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
      WBls:0000004 0.990286 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        12.5843 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        6.78729 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
      WBls:0000024 0.35672 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        1.99612 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        3.41767 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        4.43834 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        5.02929 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
      WBls:0000038 0.597583 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
        1.92173 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        3.24588 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
      WBls:0000041 (13)
      WBls:0000101 1.20265 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        1.99558 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00228895
      00228896
      00228897
    Ortholog (24)
    Paralog: WBGene00147864 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00150553 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00151678 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00192994 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to enable hexosaminidase activity. Predicted to be involved in carbohydrate metabolic process. Is an ortholog of C. elegans hex-5. In C. elegans, hex-5 is involved in carbohydrate metabolic process. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN31063
    Corresponding_transcript: CBN31063.1
    Other_sequence: ACC08456_1
      CJC07665_1
      CJC14575_1
      Oden_isotig14719
      Dviv_isotig24145
      FC553712.1
      Oden_isotig14720
  Experimental_info: Microarray_results: GPL14142_CBN31063_779-838_0.886_16_C
      GPL14142_CBN31063_1096-1155_0.865_32_B
      GPL14142_CBN31063_1167-1226_0.909_9_A
  Method: Gene