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WormBase Tree Display for Gene: WBGene00193130

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Name Class

WBGene00193130SMapS_parentSequenceCbre_Contig2
IdentityVersion2
NameCGC_nameCbn-pcdr-1From_analysisInferred_from_orthology
Sequence_nameCBN31165
Molecular_nameCBN31165
CBN31165.1
CN35917
Public_nameCbn-pcdr-1
SpeciesCaenorhabditis brenneri
HistoryVersion_change120 May 2009 11:55:53WBPerson1847EventCreated
201 Oct 2019 10:47:49WBPerson1983Name_changeCGC_nameCbn-pcdr-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpcdr
RNASeq_FPKMWBls:00000020.345574From_analysisRNASeq.brenneri.WBls:0000002.control_mean
1.30329From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
RNASeq.brenneri.WBls:0000002.control_median
2.15245From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
WBls:000000414.4612From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
1.73606From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
8.09863From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
WBls:000002412.2378From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
13.545From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
15.0574From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
15.2653From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
9.33581From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
WBls:00000384.17321From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
4.23308From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
4.29295From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
WBls:0000041 (15)
WBls:00001011.26039From_analysisRNASeq.brenneri.total_over_all_stages.control_median
2.38824From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
GO_annotation00229027
00229028
00229029
Ortholog (29)
Paralog (16)
Structured_descriptionAutomated_descriptionPredicted to enable G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Is an ortholog of C. elegans pcdr-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN31165
Corresponding_transcriptCBN31165.1
Other_sequence (15)
Experimental_infoMicroarray_resultsGPL14142_CBN31165_214-273_0.906_9_A
GPL14142_CBN31165_574-633_0.929_4_C
GPL14142_CBN31165_732-791_0.793_80_B
MethodGene