WormBase Tree Display for Gene: WBGene00194337

WBGene00194337 SMap: S_parent: Sequence: Cbre_Contig9
  Identity: Version: 8
    Name: CGC_name: Cbn-lgc-47 From_analysis: Inferred_from_orthology
      Sequence_name: CBN32372
      Molecular_name: CBN32372
        CBN32372.1
        CN34792
      Public_name: Cbn-lgc-47
    Species: Caenorhabditis brenneri
    History: Version_change: 1 20 May 2009 11:55:53 WBPerson1847 Event: Created
        2 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Cbn-lgc-47
        3 08 Feb 2019 15:42:28 WBPerson1983 Name_change: CGC_name: Removed
        4 08 May 2019 10:09:24 WBPerson1983 Name_change: CGC_name: Cbn-lgc-47
        5 01 Oct 2019 10:47:49 WBPerson1983 Name_change: CGC_name: Removed
        6 27 Nov 2019 12:48:14 WBPerson1983 Name_change: CGC_name: Cbn-lgc-47
        7 28 May 2021 19:05:20 WBPerson1983 Name_change: CGC_name: Removed
        8 28 Jul 2021 11:12:28 WBPerson1983 Name_change: CGC_name: Cbn-lgc-47
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lgc
    RNASeq_FPKM: WBls:0000002 14.3298 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
        3.15703 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
        4.262 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
        5.47055 From_analysis: RNASeq.brenneri.WBls:0000002.control_mean
        5.54572 From_analysis: RNASeq.brenneri.WBls:0000002.control_median
        6.82944 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
        7.82102 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
        8.47049 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
        9.83568 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
      WBls:0000004 0.7162 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        1.4324 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
      WBls:0000024 10.6114 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        13.1995 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        16.9024 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        18.8611 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        24.9807 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
      WBls:0000038 3.47625 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        3.64794 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        3.81964 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 (12)
      WBls:0000101 1.50554 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        3.05296 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00230482
      00230483
      00230484
      00230485
      00230486
      00230487
    Ortholog (31)
    Paralog (128)
    Structured_description: Automated_description: Predicted to enable extracellular ligand-gated monoatomic ion channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans lgc-47. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN32372
    Corresponding_transcript: CBN32372.1
    Other_sequence: CR12136
      CRC04176_1
      FD515496.1
      EX534996.1
      CSC01871_1
  Experimental_info: Microarray_results: GPL14142_CBN32372_15-74_0.914_16_C
      GPL14142_CBN32372_123-182_0.945_4_A
      GPL14142_CBN32372_369-428_0.966_1_B
  Remark: [190208 pad] The CGC name Cbn-lgc-47 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [191001 pad] The CGC name Cbn-lgc-47 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210528 pad] The CGC name Cbn-lgc-47 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene