WormBase Tree Display for Gene: WBGene00194710
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WBGene00194710 | SMap | S_parent | Sequence | C30B5 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | mks-2 | Person_evidence | WBPerson2136 | |||
Sequence_name | C30B5.9 | ||||||
Molecular_name | C30B5.9 | ||||||
C30B5.9.1 | |||||||
CE45825 | |||||||
Other_name | CELE_C30B5.9 | Accession_evidence | NDB | BX284602 | |||
Public_name | mks-2 | ||||||
DB_info | Database | WormFlux | gene | WBGene00194710 | |||
NDB | locus_tag | CELE_C30B5.9 | |||||
Panther | gene | CAEEL|WormBase=WBGene00194710|UniProtKB=C8JQP7 | |||||
family | PTHR13531 | ||||||
NCBI | gene | 13185304 | |||||
RefSeq | protein | NM_001267179.4 | |||||
TrEMBL | UniProtAcc | C8JQP7 | |||||
UniProt_GCRP | UniProtAcc | C8JQP7 | |||||
OMIM | gene | 613277 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | mks | ||||||
Allele (12) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00007025 | ||||||
00007026 | |||||||
00007027 | |||||||
00007028 | |||||||
00007029 | |||||||
00007030 | |||||||
00007031 | |||||||
Ortholog (39) | |||||||
Paralog | WBGene00022733 | Caenorhabditis elegans | From_analysis | Panther | |||
Structured_description | Automated_description | Involved in non-motile cilium assembly and protein localization to ciliary transition zone. Located in ciliary transition zone. Human ortholog(s) of this gene implicated in Joubert syndrome 2 and Meckel syndrome 2. Is an ortholog of human TMEM216 (transmembrane protein 216). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:0110988 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:25018) | ||
DOID:0070116 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:25018) | ||||
DOID:0050777 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:25018) | ||||
Molecular_info | Corresponding_CDS | C30B5.9 | |||||
Corresponding_CDS_history | C30B5.9:wp224 | ||||||
Corresponding_transcript | C30B5.9.1 | ||||||
Associated_feature | WBsf650119 | ||||||
WBsf665242 | |||||||
WBsf988101 | |||||||
WBsf988102 | |||||||
WBsf988103 | |||||||
Experimental_info | Expr_pattern | Expr1145552 | |||||
Expr2013583 | |||||||
Expr2031816 | |||||||
Microarray_results | 181850_at | ||||||
Aff_C30B5.6 | |||||||
GPL19516_CGZ0006717 | |||||||
GPL21109_C30B5.9 | |||||||
Expression_cluster (91) | |||||||
Map_info | Map | II | Position | -0.400561 | |||
Positive | Positive_clone | C30B5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference (9) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |