WormBase Tree Display for Gene: WBGene00194746
expand all nodes | collapse all nodes | view schema
| WBGene00194746 | SMap | S_parent | Sequence | Y82E9BR | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | pals-20 | Person_evidence | WBPerson260 | |||||
| Sequence_name | Y82E9BR.25 | ||||||||
| Molecular_name | Y82E9BR.25 | ||||||||
| WP:CE43951 | |||||||||
| CE43951 | |||||||||
| Y82E9BR.25.1 | |||||||||
| CE51791 | |||||||||
| Other_name | CELE_Y82E9BR.25 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | pals-20 | ||||||||
| DB_info | Database | WormFlux | gene | WBGene00194746 | |||||
| NDB | locus_tag | CELE_Y82E9BR.25 | |||||||
| NCBI | gene | 13188497 | |||||||
| RefSeq | mRNA | NM_001267914.1 | |||||||
| protein | NP_001254843.1 | ||||||||
| NM_001347298.3 | |||||||||
| UniProt | UniProtAcc | C7GIL1 | |||||||
| TrEMBL | UniProtAcc | C7GIL1 | |||||||
| UniProt_GCRP | UniProtAcc | C7GIL1 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 21 Aug 2009 11:12:49 | WBPerson1867 | Event | Created | |||
| 2 | 26 Oct 2016 09:42:35 | WBPerson2970 | Name_change | CGC_name | pals-20 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pals | ||||||||
| Allele (65) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (18) | |||||||||
| Paralog | WBGene00022337 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||||
| WormBase-Compara | |||||||||
| WBGene00022353 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
| WormBase-Compara | |||||||||
| WBGene00020540 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00022344 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00044761 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in intestine based on RNA-seq studies. Is affected by several genes including hsf-1; elt-2; and clk-1 based on microarray and RNA-seq studies. Is affected by four chemicals including stavudine; atracurium; and bortezomib based on RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y82E9BR.25 | |||||||
| Corresponding_CDS_history | Y82E9BR.25:wp256 | ||||||||
| Corresponding_transcript | Y82E9BR.25.1 | ||||||||
| Other_sequence | FC810295.1 | ||||||||
| FC815682.1 | |||||||||
| Associated_feature | WBsf666564 | ||||||||
| WBsf717860 | |||||||||
| WBsf991277 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00020007 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1162006 | ||||||||
| Microarray_results | SMD_Y119D3_456.B | ||||||||
| Aff_Y119D3_456.B | |||||||||
| GPL19516_CGZ0055213 | |||||||||
| GPL21109_Y82E9BR.25 | |||||||||
| Expression_cluster (44) | |||||||||
| Map_info | Map | III | Position | -21.9017 | |||||
| Positive | Positive_clone | Y82E9BR | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00065984 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
