WormBase Tree Display for Gene: WBGene00194889

WBGene00194889 SMap: S_parent: Sequence: cb25.fpc0058
  Identity: Version: 4
    Name: CGC_name: Cbr-mdt-8 From_analysis: Inferred_from_orthology
      Sequence_name: CBG29108
      Molecular_name: CBG29108
        CBG29108.1
        CBP47985
      Other_name: CBG_29108 Accession_evidence: NDB HE601438
      Public_name: Cbr-mdt-8
    DB_info: Database: NDB locus_tag CBG_29108
    Species: Caenorhabditis briggsae
    History: Version_change: 1 04 Dec 2009 10:16:29 WBPerson1849 Event: Created
        2 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cbr-mdt-8
        3 08 Feb 2019 15:42:27 WBPerson1983 Name_change: CGC_name: Removed
        4 08 May 2019 10:09:26 WBPerson1983 Name_change: CGC_name: Cbr-mdt-8
        5 28 May 2021 19:05:20 WBPerson1983 Name_change: CGC_name: Removed
        6 28 Jul 2021 11:12:29 WBPerson1983 Name_change: CGC_name: Cbr-mdt-8
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mdt
    RNASeq_FPKM: WBls:0000002 32.5425 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        39.3343 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        40.6397 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        44.8206 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        42.7301 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        48.6306 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        76.5197 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 113.105 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        79.783 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        96.444 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        93.6079 From_analysis: RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        95.4986 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 48.4886 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        53.373 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        58.2573 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        56.3055 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        56.3667 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        56.6738 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        62.1082 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
      WBls:0000024 (12)
      WBls:0000027 10.3355 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        19.0718 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        3.029 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        8.90567 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        10.4541 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        10.7522 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        12.0025 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 16.9518 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 15.5612 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        16.9453 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        18.0492 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        20.5372 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        22.9711 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        8.71175 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
      WBls:0000041 31.7154 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        49.2608 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        53.6422 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        54.6936 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        55.7451 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        55.9406 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        44.5302 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        49.2514 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        53.7887 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        53.9352 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 18.856 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        20.8422 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        22.9185 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        26.0709 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        29.4402 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        58.5135 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        24.4947 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        30.0576 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        33.1448 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 22.9711 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        32.7257 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        32.1289 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        37.8387 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00230855
      00230856
      00230857
    Ortholog (29)
    Structured_description: Automated_description: Predicted to enable transcription coregulator activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be part of mediator complex. Is an ortholog of C. elegans mdt-8. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG29108
    Corresponding_CDS_history: CBG29108:bp258
    Corresponding_transcript: CBG29108.1
    Other_sequence (31)
  Remark: [190208 pad] The CGC name Cbr-mdt-8 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210528 pad] The CGC name Cbr-mdt-8 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene