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WormBase Tree Display for Gene: WBGene00196059

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Name Class

WBGene00196059SMapS_parentSequenceD2023
IdentityVersion1
NameSequence_nameD2023.12
Molecular_nameD2023.12
Other_nameCELE_D2023.12Accession_evidenceNDBBX284605
Public_nameD2023.12
DB_infoDatabaseNDBlocus_tagCELE_D2023.12
NCBIgene13215487
RefSeqproteinNR_069623.1
RNAcentralURSidURS00001A766F
SpeciesCaenorhabditis elegans
HistoryVersion_change106 Oct 2010 16:59:19WBPerson4025EventCreated
StatusLive
Gene_infoBiotypeSO:0001263
AlleleWBVar01499904
WBVar01499905
WBVar01499547
WBVar01500212
WBVar01500213
WBVar01499299
WBVar01499316
WBVar01499141
RNASeq_FPKM (74)
Structured_descriptionAutomated_descriptionIs affected by several genes including lag-1; set-2; and unc-70 based on RNA-seq studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_transcriptD2023.12
Experimental_infoExpression_clusterWBPaper00057041:spc-1(cas971)_downregulated
WBPaper00057041:unc-70(cas983)_downregulated
WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
WBPaper00059440:LAG-1_interacting_germline
WBPaper00060014:set-2(zr2012)_downregulated
WBPaper00062585:hlh-26(ok1453)_upregulated_E.faecium
Map_infoPositivePositive_cloneD2023Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionV3.38266
Remark[101006] This ncRNA gene was created from the '7K ncRNA set' in the modENCODE Integrated Analysis paper.Paper_evidenceWBPaper00037953
Accession_evidencemodENCODEncRNA_frag4268
Curator_confirmedWBPerson4025
MethodGene