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WormBase Tree Display for Gene: WBGene00197906

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Name Class

WBGene00197906SMapS_parentSequenceT04C9
IdentityVersion1
NameSequence_nameT04C9.7
Molecular_nameT04C9.7
Other_nameCELE_T04C9.7Accession_evidenceNDBBX284603
Public_nameT04C9.7
DB_infoDatabaseNDBlocus_tagCELE_T04C9.7
NCBIgene13189720
RefSeqproteinNR_052351.1
RNAcentralURSidURS000009BF8A
SpeciesCaenorhabditis elegans
HistoryVersion_change106 Oct 2010 16:59:21WBPerson4025EventCreated
StatusLive
Gene_infoBiotypeSO:0001263
AlleleWBVar01500260
WBVar01500122
WBVar01500123
WBVar02132096
WBVar01264157
WBVar00830929
WBVar00830930
WBVar00830931
WBVar00830932
WBVar00830933
RNASeq_FPKM (74)
Structured_descriptionAutomated_descriptionEnriched in AVK and neurons based on RNA-seq studies. Is affected by cep-1; adr-1; and daf-2 based on RNA-seq and microarray studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_transcriptT04C9.7
Associated_featureWBsf666947
Experimental_infoExpression_clusterWBPaper00045380:cep-1(gk138)_upregulated_normal
WBPaper00055226:adr-1(tm668)_downregulated
WBPaper00055386:daf-2(e1370)_downregulated
WBPaper00055565:AVK_enriched
WBPaper00062103:neuron_enriched
WBPaper00065841:14_1
WBPaper00065841:76_0
WBPaper00065841:93_0
WBPaper00065841:117_0
Map_infoPositivePositive_cloneT04C9Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIII-1.42746
Remark[101006] This ncRNA gene was created from the '7K ncRNA set' in the modENCODE Integrated Analysis paper.Paper_evidenceWBPaper00037953
Accession_evidencemodENCODEncRNA_frag1991
Curator_confirmedWBPerson4025
MethodGene