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WormBase Tree Display for Gene: WBGene00197976

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Name Class

WBGene00197976SMapS_parentSequenceF56D1
IdentityVersion1
NameSequence_nameF56D1.10
Molecular_nameF56D1.10
Other_nameCELE_F56D1.10Accession_evidenceNDBBX284602
Public_nameF56D1.10
DB_infoDatabaseNDBlocus_tagCELE_F56D1.10
NCBIgene13184985
RefSeqproteinNR_051070.1
RNAcentralURSidURS000035C4E7
SpeciesCaenorhabditis elegans
HistoryVersion_change106 Oct 2010 16:59:21WBPerson4025EventCreated
StatusLive
Gene_infoBiotypeSO:0001263
AlleleWBVar01499702
WBVar01498435
WBVar01499764
WBVar00366232
WBVar00732195
RNASeq_FPKM (74)
Structured_descriptionAutomated_descriptionEnriched in AFD based on RNA-seq studies. Is affected by several genes including cep-1; met-2; and spr-5 based on RNA-seq studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_transcriptF56D1.10
Associated_featureWBsf657160
Experimental_infoExpression_clusterWBPaper00045380:cep-1(gk138)_downregulated_normal
WBPaper00055334:DLC-1_interacting
WBPaper00059824:rnp-6(dh1127)_regulated_OP50
WBPaper00060886:spr-5(by101);met-2(n4256)_downregulated
WBPaper00065158:AFD_enriched
Map_infoPositivePositive_cloneF56D1Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII-1.36912
Remark[101006] This ncRNA gene was created from the '7K ncRNA set' in the modENCODE Integrated Analysis paper.Paper_evidenceWBPaper00037953
Accession_evidencemodENCODEncRNA_frag985
Curator_confirmedWBPerson4025
MethodGene