WormBase Tree Display for Gene: WBGene00198772

WBGene00198772 SMap: S_parent: Sequence: T25C12
  Identity: Version: 1
    Name: Sequence_name: T25C12.6
      Molecular_name: T25C12.6
      Other_name: CELE_T25C12.6 Accession_evidence: NDB BX284606
      Public_name: T25C12.6
    DB_info: Database: NDB locus_tag CELE_T25C12.6
        NCBI gene 13222847
        RefSeq protein NR_072135.1
        RNAcentral URSid URS00003284DA
    Species: Caenorhabditis elegans
    History: Version_change: 1 06 Oct 2010 16:59:21 WBPerson4025 Event: Created
    Status: Live
  Gene_info: Biotype: SO:0001263
    Allele: WBVar01499887
      WBVar01499888
      WBVar01499710
      WBVar01500001
      WBVar01500002
      WBVar00517493
      WBVar01498960
      WBVar01500067
    RNASeq_FPKM (74)
    Structured_description: Automated_description: Enriched in neurons and sensory neurons based on RNA-seq studies. Is affected by several genes including daf-2; eat-2; and pgl-1 based on RNA-seq and microarray studies. Is affected by silicon dioxide nanoparticle and Oligosaccharides based on microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_transcript: T25C12.6
    Associated_feature: WBsf648546
  Experimental_info: Expression_cluster: WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00055334:DLC-1_interacting
      WBPaper00055386:daf-2(e1370)_upregulated
      WBPaper00055386:eat-2(ad465)_upregulated
      WBPaper00055482:pmt-2(RNAi)_upregulated
      WBPaper00060100:SiNP_upregulated_mRNA
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00062103:neuron_enriched
      WBPaper00064306:Agaro-oligosaccharides_upregulated
      WBPaper00065975:P-body_vs_WholeAnimal_depleted
  Map_info: Positive: Positive_clone: T25C12 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: X 3.78178
  Remark: [101006] This ncRNA gene was created from the '7K ncRNA set' in the modENCODE Integrated Analysis paper. Paper_evidence: WBPaper00037953
      Accession_evidence: modENCODE ncRNA_frag6496
      Curator_confirmed: WBPerson4025
  Method: Gene