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WormBase Tree Display for Gene: WBGene00198873

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Name Class

WBGene00198873SMapS_parentSequenceF10C2
IdentityVersion1
NameSequence_nameF10C2.11
Molecular_nameF10C2.11
Other_nameCELE_F10C2.11Accession_evidenceNDBBX284605
Public_nameF10C2.11
DB_infoDatabaseNDBlocus_tagCELE_F10C2.11
NCBIgene13215588
RefSeqproteinNR_069675.1
RNAcentralURSidURS00000AB234
SpeciesCaenorhabditis elegans
HistoryVersion_change106 Oct 2010 16:59:21WBPerson4025EventCreated
StatusLive
Gene_infoBiotypeSO:0001263
Allele (16)
RNASeq_FPKM (74)
Structured_descriptionAutomated_descriptionEnriched in AVK and neurons based on RNA-seq studies. Is affected by several genes including dlc-1; pptr-1; and etr-1 based on RNA-seq and microarray studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_transcriptF10C2.11
Associated_featureWBsf647324
WBsf661844
Experimental_infoExpression_clusterWBPaper00055334:DLC-1_interacting
WBPaper00055565:AVK_enriched
WBPaper00056167:ifo-1(kc2)_upregulated
WBPaper00057140:pptr-1(tm3103)_upregulated
WBPaper00062103:neuron_enriched
WBPaper00062325:muscle_depleted_noncoding-RNA
WBPaper00062585:hlh-26(ok1453)_downregulated_E.faecium
Map_infoPositivePositive_cloneF10C2Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionV3.61253
Remark[101006] This ncRNA gene was created from the '7K ncRNA set' in the modENCODE Integrated Analysis paper.Paper_evidenceWBPaper00037953
Accession_evidencemodENCODEncRNA_frag4314
Curator_confirmedWBPerson4025
MethodGene