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WormBase Tree Display for Gene: WBGene00199115

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Name Class

WBGene00199115SMapS_parentSequenceT23E1
IdentityVersion1
NameSequence_nameT23E1.5
Molecular_nameT23E1.5
Other_nameCELE_T23E1.5Accession_evidenceNDBBX284604
Public_nameT23E1.5
DB_infoDatabaseNDBlocus_tagCELE_T23E1.5
NCBIgene13192551
RefSeqproteinNR_053026.1
RNAcentralURSidURS0000195177
SpeciesCaenorhabditis elegans
HistoryVersion_change106 Oct 2010 16:59:21WBPerson4025EventCreated
StatusLive
Gene_infoBiotypeSO:0001263
AlleleWBVar02123920
WBVar02120496
WBVar01498316
WBVar00896976
WBVar00896977
WBVar02121992
WBVar01499633
WBVar02123508
RNASeq_FPKM (74)
Structured_descriptionAutomated_descriptionEnriched in neurons and sensory neurons based on RNA-seq studies. Is affected by several genes including cep-1; dlc-1; and adr-1 based on RNA-seq studies. Is affected by silicon dioxide nanoparticle based on microarray studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_transcriptT23E1.5
Experimental_infoExpression_clusterWBPaper00045380:cep-1(gk138)_upregulated_normal
WBPaper00055226:adr-1(tm668)_upregulated
WBPaper00055334:DLC-1_interacting
WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
WBPaper00060100:SiNP_upregulated_mRNA
WBPaper00060661:sensory-neuron_enriched
WBPaper00062103:neuron_enriched
Map_infoPositivePositive_cloneT23E1Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIV-5.7321
Remark[101006] This ncRNA gene was created from the '7K ncRNA set' in the modENCODE Integrated Analysis paper.Paper_evidenceWBPaper00037953
Accession_evidencemodENCODEncRNA_frag2562
Curator_confirmedWBPerson4025
MethodGene