WormBase Tree Display for Gene: WBGene00200116
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WBGene00200116 | SMap | S_parent | Sequence | R90 | ||||
---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | ||||||
Name | Sequence_name | R90.11 | ||||||
Molecular_name | R90.11 | |||||||
Other_name | CELE_R90.11 | Accession_evidence | NDB | BX284605 | ||||
Public_name | R90.11 | |||||||
DB_info | Database | NDB | locus_tag | CELE_R90.11 | ||||
NCBI | gene | 13215971 | ||||||
RefSeq | protein | NR_069820.1 | ||||||
RNAcentral | URSid | URS00004DE81B | ||||||
Species | Caenorhabditis elegans | |||||||
History | Version_change | 1 | 06 Oct 2010 16:59:22 | WBPerson4025 | Event | Created | ||
Status | Live | |||||||
Gene_info | Biotype | SO:0001263 | ||||||
Allele | WBVar02061599 | |||||||
WBVar01057945 | ||||||||
WBVar02024435 | ||||||||
WBVar01500212 | ||||||||
WBVar01500213 | ||||||||
WBVar01499299 | ||||||||
WBVar01499316 | ||||||||
RNASeq_FPKM (74) | ||||||||
Structured_description | Automated_description | Enriched in neurons based on RNA-seq studies. Is affected by cep-1 and fzo-1 based on RNA-seq studies. Is affected by Oligosaccharides based on microarray studies. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | |||||||
WBPerson37462 | ||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||||
Molecular_info | Corresponding_transcript | R90.11 | ||||||
Associated_feature | WBsf669534 | |||||||
Experimental_info | Expression_cluster | WBPaper00045380:cep-1(gk138)_upregulated_normal | ||||||
WBPaper00045380:cep-1(gk138)_upregulated_UV | ||||||||
WBPaper00061409:neuronal-fzo-1(RNAi)_upregulated | ||||||||
WBPaper00062103:neuron_enriched | ||||||||
WBPaper00064306:Agaro-oligosaccharides_upregulated | ||||||||
Map_info | Positive | Positive_clone | R90 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Interpolated_map_position | V | 4.72325 | ||||||
Remark | [101006] This ncRNA gene was created from the '7K ncRNA set' in the modENCODE Integrated Analysis paper. | Paper_evidence | WBPaper00037953 | |||||
Accession_evidence | modENCODE | ncRNA_frag4444 | ||||||
Curator_confirmed | WBPerson4025 | |||||||
Method | Gene |