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WormBase Tree Display for Gene: WBGene00200116

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Name Class

WBGene00200116SMapS_parentSequenceR90
IdentityVersion1
NameSequence_nameR90.11
Molecular_nameR90.11
Other_nameCELE_R90.11Accession_evidenceNDBBX284605
Public_nameR90.11
DB_infoDatabaseNDBlocus_tagCELE_R90.11
NCBIgene13215971
RefSeqproteinNR_069820.1
RNAcentralURSidURS00004DE81B
SpeciesCaenorhabditis elegans
HistoryVersion_change106 Oct 2010 16:59:22WBPerson4025EventCreated
StatusLive
Gene_infoBiotypeSO:0001263
AlleleWBVar02061599
WBVar01057945
WBVar02024435
WBVar01500212
WBVar01500213
WBVar01499299
WBVar01499316
RNASeq_FPKM (74)
Structured_descriptionAutomated_descriptionEnriched in neurons based on RNA-seq studies. Is affected by cep-1 and fzo-1 based on RNA-seq studies. Is affected by Oligosaccharides based on microarray studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_transcriptR90.11
Associated_featureWBsf669534
Experimental_infoExpression_clusterWBPaper00045380:cep-1(gk138)_upregulated_normal
WBPaper00045380:cep-1(gk138)_upregulated_UV
WBPaper00061409:neuronal-fzo-1(RNAi)_upregulated
WBPaper00062103:neuron_enriched
WBPaper00064306:Agaro-oligosaccharides_upregulated
Map_infoPositivePositive_cloneR90Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionV4.72325
Remark[101006] This ncRNA gene was created from the '7K ncRNA set' in the modENCODE Integrated Analysis paper.Paper_evidenceWBPaper00037953
Accession_evidencemodENCODEncRNA_frag4444
Curator_confirmedWBPerson4025
MethodGene