WormBase Tree Display for Gene: WBGene00200442
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| WBGene00200442 | SMap | S_parent | Sequence | Y54E10A | ||||
|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | ||||||
| Name | Sequence_name | Y54E10A.26 | ||||||
| Molecular_name | Y54E10A.26 | |||||||
| Other_name | CELE_Y54E10A.26 | Accession_evidence | NDB | BX284601 | ||||
| Public_name | Y54E10A.26 | |||||||
| DB_info | Database | NDB | locus_tag | CELE_Y54E10A.26 | ||||
| NCBI | gene | 13179717 | ||||||
| RefSeq | protein | NR_050028.1 | ||||||
| RNAcentral | URSid | URS00004D3856 | ||||||
| Species | Caenorhabditis elegans | |||||||
| History | Version_change | 1 | 06 Oct 2010 16:59:22 | WBPerson4025 | Event | Created | ||
| Status | Live | |||||||
| Gene_info | Biotype | SO:0001263 | ||||||
| Allele | WBVar00330091 | |||||||
| WBVar00625099 | ||||||||
| WBVar01499416 | ||||||||
| WBVar01499786 | ||||||||
| WBVar01499985 | ||||||||
| RNASeq_FPKM (74) | ||||||||
| Structured_description | Automated_description | Enriched in neurons based on RNA-seq studies. Is affected by cep-1; daf-2; and pmt-2 based on RNA-seq and microarray studies. Is affected by silicon dioxide nanoparticle based on microarray studies. | Paper_evidence | WBPaper00065943 | ||||
| Curator_confirmed | WBPerson324 | |||||||
| WBPerson37462 | ||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||
| Molecular_info | Corresponding_transcript | Y54E10A.26 | ||||||
| Associated_feature | WBsf649016 | |||||||
| WBsf663761 | ||||||||
| WBsf664024 | ||||||||
| Experimental_info | Expression_cluster | WBPaper00045380:cep-1(gk138)_upregulated_normal | ||||||
| WBPaper00055386:daf-2(e1370)_downregulated | ||||||||
| WBPaper00055482:pmt-2(RNAi)_downregulated | ||||||||
| WBPaper00060100:SiNP_upregulated_mRNA | ||||||||
| WBPaper00062103:neuron_enriched | ||||||||
| Map_info | Positive | Positive_clone | Y54E10A | Inferred_automatically | From sequence, transcript, pseudogene data | |||
| Interpolated_map_position | I | -4.33228 | ||||||
| Remark | [101006] This ncRNA gene was created from the '7K ncRNA set' in the modENCODE Integrated Analysis paper. | Paper_evidence | WBPaper00037953 | |||||
| Accession_evidence | modENCODE | ncRNA_frag114 | ||||||
| Curator_confirmed | WBPerson4025 | |||||||
| Method | Gene |
