WormBase Tree Display for Gene: WBGene00205190
expand all nodes | collapse all nodes | view schema
| WBGene00205190 | SMap | S_parent | Sequence | PPA_ChrI | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 6 | |||||||
| Name | CGC_name | Ppa-kcnl-4 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA32329 | ||||||||
| Molecular_name | PPA32329 | ||||||||
| PPA32329.1 | |||||||||
| PP65158 | |||||||||
| Other_name | UMM-S71-2.54 | Person_evidence | WBPerson606 | ||||||
| Public_name | Ppa-kcnl-4 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 04 Nov 2010 10:28:59 | WBPerson4055 | Event | Imported | from Assembly 2 | ||
| 2 | 20 Mar 2018 10:26:12 | WBPerson4025 | Name_change | CGC_name | Ppa-kcnl-4 | ||||
| 3 | 08 Feb 2019 15:42:28 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 4 | 08 May 2019 10:09:26 | WBPerson1983 | Name_change | CGC_name | Ppa-kcnl-4 | ||||
| 5 | 28 May 2021 19:05:20 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 6 | 28 Jul 2021 11:12:29 | WBPerson1983 | Name_change | CGC_name | Ppa-kcnl-4 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | kcnl | ||||||||
| RNASeq_FPKM | WBls:0000032 | 27.1942 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 11.0113 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
| 5.83958 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| GO_annotation | 00231543 | ||||||||
| 00231544 | |||||||||
| 00231545 | |||||||||
| 00231546 | |||||||||
| 00231547 | |||||||||
| Ortholog (28) | |||||||||
| Paralog | WBGene00098343 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
| WBGene00204020 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable calmodulin binding activity and small conductance calcium-activated potassium channel activity. Predicted to be involved in potassium ion transport. Predicted to be located in membrane. Is an ortholog of C. elegans kcnl-4. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA32329 | |||||||
| Corresponding_transcript | PPA32329.1 | ||||||||
| Other_sequence | CJC01763_1 | ||||||||
| JI170634.1 | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_6357 | |||||||
| GPL14372_Probes_6358 | |||||||||
| GPL14372_Probes_6359 | |||||||||
| GPL14372_Probes_6360 | |||||||||
| GPL14372_Probes_6361 | |||||||||
| Expression_cluster | WBPaper00041207:PP_dauer_up | ||||||||
| Remark | [190208 pad] The CGC name Ppa-kcnl-4 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| [210528 pad] The CGC name Ppa-kcnl-4 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
