WormBase Tree Display for Gene: WBGene00205391
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| WBGene00205391 | SMap | S_parent | Sequence | PPA_ChrIII | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 6 | |||||||
| Name | CGC_name | Ppa-oxy-4 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA32530 | ||||||||
| Molecular_name | PPA32530 | ||||||||
| PPA32530.1 | |||||||||
| PP52065 | |||||||||
| Other_name | UMM-S2864-9.13 | Person_evidence | WBPerson606 | ||||||
| Public_name | Ppa-oxy-4 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 04 Nov 2010 10:29:00 | WBPerson4055 | Event | Imported | from Assembly 2 | ||
| 2 | 20 Mar 2018 10:26:11 | WBPerson4025 | Name_change | CGC_name | Ppa-oxy-4 | ||||
| 3 | 08 Feb 2019 15:42:27 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 4 | 08 May 2019 10:09:24 | WBPerson1983 | Name_change | CGC_name | Ppa-oxy-4 | ||||
| 5 | 28 May 2021 19:05:20 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 6 | 28 Jul 2021 11:12:28 | WBPerson1983 | Name_change | CGC_name | Ppa-oxy-4 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | oxy | ||||||||
| RNASeq_FPKM | WBls:0000032 | 8.74592 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 10.3289 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | ||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| 6.35827 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||
| 8.74592 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| GO_annotation | 00231590 | ||||||||
| Ortholog (33) | |||||||||
| Paralog | WBGene00105259 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Predicted to be involved in endoplasmic reticulum to Golgi vesicle-mediated transport. Is an ortholog of C. elegans oxy-4. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA32530 | |||||||
| Corresponding_transcript | PPA32530.1 | ||||||||
| Other_sequence | ACC31203_1 | ||||||||
| CBC11605_1 | |||||||||
| CRC07735_1 | |||||||||
| CJC03302_1 | |||||||||
| CBC02345_1 | |||||||||
| EX550309.1 | |||||||||
| CR10114 | |||||||||
| Acan_isotig10604 | |||||||||
| CR01293 | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_43228 | |||||||
| GPL14372_Probes_43229 | |||||||||
| GPL14372_Probes_43231 | |||||||||
| GPL14372_Probes_43233 | |||||||||
| Expression_cluster | WBPaper00041207:PP_dauer_up | ||||||||
| Remark | [190208 pad] The CGC name Ppa-oxy-4 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| [210528 pad] The CGC name Ppa-oxy-4 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
