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WormBase Tree Display for Gene: WBGene00209561

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Name Class

WBGene00209561SMapS_parentSequenceCjap.Contig17999
IdentityVersion2
NameCGC_nameCjp-tspo-1From_analysisInferred_from_orthology
Sequence_nameCJA33714
Molecular_nameCJA33714
CJA33714.1
JA43657
Public_nameCjp-tspo-1
SpeciesCaenorhabditis japonica
HistoryVersion_change128 Jul 2011 11:15:55WBPerson4055EventImportedAugustus import
228 May 2021 19:05:19WBPerson1983Name_changeCGC_nameCjp-tspo-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classtspo
RNASeq_FPKMWBls:0000004245.425From_analysisRNASeq.japonica.WBls:0000004.control_mean
RNASeq.japonica.WBls:0000004.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:0000027202.162From_analysisRNASeq.japonica.WBls:0000027.control_mean
RNASeq.japonica.WBls:0000027.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:000003870.6137From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
77.1453From_analysisRNASeq.japonica.WBls:0000038.control_mean
RNASeq.japonica.WBls:0000038.control_median
83.6769From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
WBls:0000041133.64From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
147.689From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
148.603From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
154.234From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
154.652From_analysisRNASeq.japonica.WBls:0000041.control_median
154.83From_analysisRNASeq.japonica.WBls:0000041.control_mean
155.07From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
164.546From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
167.016From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
167.839From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
WBls:0000101141.578From_analysisRNASeq.japonica.total_over_all_stages.control_mean
154.234From_analysisRNASeq.japonica.total_over_all_stages.control_median
GO_annotation00233262
OrthologWBGene00042588Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00077771Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00085828Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00112622Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
WBGene00139553Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00144475Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00150612Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00155085Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
CBOVI.g9757Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g1160Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g19113Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g20989Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g4818Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g9794Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g8294Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g11687Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g5142Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
Cni-C41G7.9Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g14898Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00089.g3928Caenorhabditis sinicaFrom_analysisWormBase-Compara
GCK72_000461Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g06363Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g11534Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_10070710Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrI_pilon.g1828Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00238490Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00238493Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00294506Trichuris murisFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be located in membrane. Is an ortholog of C. elegans tspo-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCJA33714
Corresponding_transcriptCJA33714.1
Other_sequenceCJC17893_1
GO240382.1
OOC00960_1
MIC07020_1
AYC03881_1
BU087386.1
GP01801
BMC02787_1
NAC00446_1
EX009666.1
Tcir_isotig07151
WBC01768_1
EX013637.1
PPC05789_1
HGC01119_2
ASC21773_1
HBC18371_1
ES411535.1
HCC02347_1
FE910371.1
MJ00671
JI172709.1
HG03462
PPC17428_1
TDC00381_1
JO467737.1
Oden_isotig18030
Dviv_isotig03927
GW412368.1
ACC00698_1
FE919849.1
BXC03464_1
SSC01796_1
HG12206
HC07790
AE00169
HG00093
AM743643.1
AE02216
Acan_isotig11177
CBC03671_1
NBC09728_1
PSC01577_1
Dviv_isotig03926
Dviv_isotig03931
CK850309.1
GW408498.1
EX013979.1
AS02245
HGC01119_1
OF00202
MJC00003_1
HG02318
GW406519.1
CR04149
MI02537
GW408846.1
DIC00653_1
Name_isotig06946
HGC09587_1
HGC11014_1
EX012451.1
Dviv_isotig03928
PPC05344_1
GW412155.1
Dviv_isotig03925
NB09722
BG467691.1
HGC08964_1
DI01103
HG02003
BUC02039_1
SS01421
Tcol_isotig12652
CJC09035_1
CB043007.1
Dviv_isotig03924
ES739528.1
Hbac_isotig03495
HC03977
HBC04531_1
EX013248.1
BU666848.1
GPC00055_1
BU088610.1
EX008815.1
Name_isotig02677
CRC06944_1
GE639040.1
MethodGene