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WormBase Tree Display for Gene: WBGene00211822

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Name Class

WBGene00211822SMapS_parentSequenceCjap.Contig1079
IdentityVersion2
NameCGC_nameCjp-oatr-1.2From_analysisInferred_from_orthology
Sequence_nameCJA35975
Molecular_nameCJA35975
CJA35975.1
JA59686
Public_nameCjp-oatr-1.2
SpeciesCaenorhabditis japonica
HistoryVersion_change128 Jul 2011 11:15:56WBPerson4055EventImportedAugustus import
220 Mar 2018 10:26:12WBPerson4025Name_changeCGC_nameCjp-oatr-1.2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classoatr
RNASeq_FPKMWBls:00000045.45801From_analysisRNASeq.japonica.WBls:0000004.control_mean
RNASeq.japonica.WBls:0000004.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:000002756.7377From_analysisRNASeq.japonica.WBls:0000027.control_mean
RNASeq.japonica.WBls:0000027.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:000003840.8642From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
42.8467From_analysisRNASeq.japonica.WBls:0000038.control_mean
RNASeq.japonica.WBls:0000038.control_median
44.8293From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
WBls:0000041104.783From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
107.552From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
127.356From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
34.1365From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
55.1811From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
69.6724From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
69.6808From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
75.9299From_analysisRNASeq.japonica.WBls:0000041.control_median
81.3176From_analysisRNASeq.japonica.WBls:0000041.control_mean
82.1791From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
WBls:000010156.7377From_analysisRNASeq.japonica.total_over_all_stages.control_median
61.4177From_analysisRNASeq.japonica.total_over_all_stages.control_mean
GO_annotation00234335
00234336
OrthologWBGene00015814Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00055473Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00075872Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00076457Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00139135Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00030775Caenorhabditis briggsaeFrom_analysisWormBase-Compara
CBOVI.g5090Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g502Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g21389Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g127Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g13734Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g13735Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g13736Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g22714Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g22743Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g8243Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g8244Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g9793Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g9794Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g13400Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP38.g14908Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g2048Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g3623Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00207.g7016Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-C16A3.10Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g16141Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_02190.g25327Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_16443Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_010720Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g04937Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g19357Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g19358Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30171610Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00104741Pristionchus pacificusFrom_analysisWormBase-Compara
chrIII_pilon.g7930Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00260412Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00292318Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00135947Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00122089Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00125319Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00131874Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00183841Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00208671Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00219078Caenorhabditis japonicaFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable pyridoxal phosphate binding activity and transaminase activity. Is an ortholog of C. elegans oatr-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCJA35975
Corresponding_transcriptCJA35975.1
Other_sequenceTcol_isotig04895
EX549611.1
FK806315.1
FG619233.1
Tcol_isotig04893
MethodGene