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WormBase Tree Display for Gene: WBGene00212294

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Name Class

WBGene00212294SMapS_parentSequenceCjap.Contig18019
IdentityVersion2
NameCGC_nameCjp-ncbp-1.1From_analysisInferred_from_orthology
Sequence_nameCJA36447
Molecular_nameCJA36447a
CJA36447a.1
JA62365
CJA36447b
JA55931
CJA36447b.1
Public_nameCjp-ncbp-1.1
SpeciesCaenorhabditis japonica
HistoryVersion_change128 Jul 2011 11:15:56WBPerson4055EventImportedAugustus import
220 Mar 2018 10:26:12WBPerson4025Name_changeCGC_nameCjp-ncbp-1.1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classncbp
RNASeq_FPKMWBls:000000445.9785From_analysisRNASeq.japonica.WBls:0000004.control_mean
RNASeq.japonica.WBls:0000004.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:000002727.723From_analysisRNASeq.japonica.WBls:0000027.control_mean
RNASeq.japonica.WBls:0000027.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:000003835.0887From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
35.3263From_analysisRNASeq.japonica.WBls:0000038.control_mean
RNASeq.japonica.WBls:0000038.control_median
35.5639From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
WBls:000004116.8445From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
17.8904From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
18.1906From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
20.0532From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
27.5142From_analysisRNASeq.japonica.WBls:0000041.control_median
28.5163From_analysisRNASeq.japonica.WBls:0000041.control_mean
34.9752From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
38.2306From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
38.8405From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
43.1052From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
WBls:000010128.6526From_analysisRNASeq.japonica.total_over_all_stages.control_mean
34.9752From_analysisRNASeq.japonica.total_over_all_stages.control_median
GO_annotation00234545
00234546
00234547
00234548
00234549
Ortholog (21)
ParalogWBGene00124419Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00218872Caenorhabditis japonicaFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable RNA cap binding activity. Predicted to be involved in RNA metabolic process and mRNA export from nucleus. Predicted to be part of nuclear cap binding activity complex. Is an ortholog of C. elegans ncbp-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCJA36447a
CJA36447b
Corresponding_transcriptCJA36447a.1
CJA36447b.1
Other_sequenceCRC07206_1
CR00666
MethodGene