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WormBase Tree Display for Gene: WBGene00218637

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Name Class

WBGene00218637SMapS_parentSequenceCjap.Contig17553
IdentityVersion1
NameSequence_nameCJA42789
Molecular_nameCJA42789
CJA42789.1
JA51516
Public_nameCJA42789
SpeciesCaenorhabditis japonica
HistoryVersion_change128 Jul 2011 11:15:55WBPerson4055EventImportedAugustus import
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000000477.4933From_analysisRNASeq.japonica.WBls:0000004.control_mean
RNASeq.japonica.WBls:0000004.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:000002742.9543From_analysisRNASeq.japonica.WBls:0000027.control_mean
RNASeq.japonica.WBls:0000027.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:000003844.242From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
44.8769From_analysisRNASeq.japonica.WBls:0000038.control_mean
RNASeq.japonica.WBls:0000038.control_median
45.5117From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:000004112.6609From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
1.30042From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
13.0814From_analysisRNASeq.japonica.WBls:0000041.control_mean
1.61738From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
23.0995From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
3.4087From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
4.36027From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
5.06797From_analysisRNASeq.japonica.WBls:0000041.control_median
52.4282From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
5.77567From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
WBls:000010112.6609From_analysisRNASeq.japonica.total_over_all_stages.control_median
24.2194From_analysisRNASeq.japonica.total_over_all_stages.control_mean
Ortholog (22)
Paralog (31)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Spectrin/alpha-actinin; SH3-like domain superfamily; SH3 domain; CH domain superfamily; Calponin homology domain; Calponin homology (CH) domain; Variant SH3 domain; and Spectrin repeat. Is an ortholog of C. elegans atn-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCJA42789
Corresponding_transcriptCJA42789.1
Other_sequence (15)
Experimental_infoMicroarray_resultsGPL14145_CJA07132_4631-4690_0.776_327_C
MethodGene