WormBase Tree Display for Gene: WBGene00219270
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| WBGene00219270 | SMap | S_parent | Sequence | T07A9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | mir-5550 | Person_evidence | WBPerson18 | |||||
| Sequence_name | T07A9.17 | ||||||||
| Molecular_name | T07A9.17 | ||||||||
| T07A9.17a | |||||||||
| T07A9.17b | |||||||||
| Other_name | cel-mir-5550 | Remark | miRBase V21 import | ||||||
| CELE_T07A9.17 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | mir-5550 | ||||||||
| DB_info | Database | miRBase | acc | MI0019071 | |||||
| NDB | locus_tag | CELE_T07A9.17 | |||||||
| NCBI | gene | 13191919 | |||||||
| RefSeq | protein | NR_052868.2 | |||||||
| RNAcentral | URSid | URS0000112B75 | |||||||
| URS00005B22F0 | |||||||||
| URS00007894B3 | |||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 23 Sep 2011 09:14:39 | WBPerson1867 | Event | Created | |||
| 2 | 20 Oct 2011 15:01:41 | WBPerson1983 | Name_change | CGC_name | mir-5550 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001265 | |||||||
| Gene_class | mir | ||||||||
| Allele (11) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Structured_description | Automated_description | Is affected by several genes including daf-2; prg-1; and alg-1 based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_transcript | T07A9.17 | |||||||
| T07A9.17a | |||||||||
| T07A9.17b | |||||||||
| Experimental_info | RNAi_result | WBRNAi00035285 | Inferred_automatically | RNAi_primary | |||||
| Expression_cluster (11) | |||||||||
| Map_info | Map | IV | Position | -26.0821 | |||||
| Positive | Positive_clone | T07A9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
