WormBase Tree Display for Gene: WBGene00219733
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| WBGene00219733 | SMap | S_parent | Sequence | T21G5 | ||||
|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | ||||||
| Name | CGC_name | linc-53 | Person_evidence | WBPerson6396 | ||||
| Sequence_name | T21G5.11 | |||||||
| Molecular_name | T21G5.11 | |||||||
| Other_name | CELE_T21G5.11 | Accession_evidence | NDB | BX284601 | ||||
| Public_name | linc-53 | |||||||
| DB_info | Database | NDB | locus_tag | CELE_T21G5.11 | ||||
| NCBI | gene | 24104916 | ||||||
| RefSeq | protein | NR_101574.1 | ||||||
| RNAcentral | URSid | URS00002472A6 | ||||||
| Species | Caenorhabditis elegans | |||||||
| History | Version_change | 1 | 13 Aug 2012 10:25:36 | WBPerson1983 | Event | Created | ||
| Status | Live | |||||||
| Gene_info | Biotype | SO:0001641 | ||||||
| Gene_class | linc | |||||||
| Allele (20) | ||||||||
| RNASeq_FPKM (74) | ||||||||
| Structured_description | Automated_description | Is affected by several genes including nhr-49; cep-1; and rnp-6 based on RNA-seq studies. Is affected by stavudine and Zidovudine based on RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||
| Curator_confirmed | WBPerson324 | |||||||
| WBPerson37462 | ||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||
| Molecular_info | Corresponding_transcript | T21G5.11 | ||||||
| Experimental_info | Expression_cluster | WBPaper00045380:cep-1(gk138)_downregulated_normal | ||||||
| WBPaper00045380:cep-1(gk138)_downregulated_UV | ||||||||
| WBPaper00050504:hrp-2(RNAi)_downregulated | ||||||||
| WBPaper00053302:stavudine_72h_regulated | ||||||||
| WBPaper00053302:zidovudine_72h_regulated | ||||||||
| WBPaper00059824:rnp-6(dh1127)_regulated_OP50 | ||||||||
| WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi) | ||||||||
| WBPaper00061530:nhr-49(e2144)_downregulated | ||||||||
| WBPaper00065993:glp-1(e2141)_upregulated | ||||||||
| Map_info | Map | I | Position | 1.41915 | ||||
| Positive | Positive_clone | T21G5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Pseudo_map_position | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||
| Method | Gene |
