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WormBase Tree Display for Gene: WBGene00219956

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Name Class

WBGene00219956SMapS_parentSequenceF48A11
IdentityVersion1
NameSequence_nameF48A11.10
Molecular_nameF48A11.10
Other_nameCELE_F48A11.10Accession_evidenceNDBBX284602
Public_nameF48A11.10
DB_infoDatabaseNDBlocus_tagCELE_F48A11.10
NCBIgene24104600
RefSeqproteinNR_101654.1
RNAcentralURSidURS0000464A49
SpeciesCaenorhabditis elegans
HistoryVersion_change113 Aug 2012 10:27:15WBPerson1983EventCreated
StatusLive
Gene_infoBiotypeSO:0001263
AlleleWBVar01500106
WBVar00697285
WBVar01498661
RNASeq_FPKM (74)
Structured_descriptionAutomated_descriptionEnriched in neurons based on RNA-seq studies. Is affected by cox-5B and sir-2.1 based on RNA-seq and microarray studies. Is affected by tetrabromobisphenol A based on microarray studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_transcriptF48A11.10
Experimental_infoRNAi_resultWBRNAi00015225Inferred_automaticallyRNAi_primary
WBRNAi00047709Inferred_automaticallyRNAi_primary
Microarray_resultsSMD_F48A11.2
184880_at
Aff_F48A11.2
GPL21109_F48A11.10
GPL3518_CE32667
Expression_clusterWBPaper00053402:cco-1(RNAi)_downregulated
WBPaper00062103:neuron_enriched
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00045294:50uM_TBBP_downregulated
Map_infoPositivePositive_cloneF48A11Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII-15.8448
Remark[120808 pad] Created as part of an ncRNA dataset from Xiao et al. 2011Paper_evidenceWBPaper00040814
MethodGene