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WormBase Tree Display for Gene: WBGene00220009

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Name Class

WBGene00220009SMapS_parentSequenceK07E1
IdentityVersion1
NameSequence_nameK07E1.2
Molecular_nameK07E1.2
Other_nameCELE_K07E1.2Accession_evidenceNDBBX284602
Public_nameK07E1.2
DB_infoDatabaseNDBlocus_tagCELE_K07E1.2
NCBIgene24104727
RefSeqproteinNR_101681.1
RNAcentralURSidURS00001F0D65
SpeciesCaenorhabditis elegans
HistoryVersion_change113 Aug 2012 10:27:15WBPerson1983EventCreated
StatusLive
Gene_infoBiotypeSO:0001267
AlleleWBVar01499702
WBVar01498435
WBVar00726550
WBVar00726551
RNASeq_FPKM (74)
Structured_descriptionAutomated_descriptionIs affected by several genes including cep-1; dpy-21; and smn-1 based on RNA-seq studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_transcriptK07E1.2
Experimental_infoExpression_clusterWBPaper00045380:cep-1(gk138)_upregulated_normal
WBPaper00050370:dpy-21(e428)_L3_downregulated
WBPaper00053388:dauer_regulated_Cluster4
WBPaper00056809:smn-1(ok355)_upregulated
WBPaper00059117:B.subtilis_upregulated
WBPaper00062156:jmjd-5(zr1234)_upregulated
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00066110:tetraploid_vs_diploid_upregulated
Map_infoPositivePositive_cloneK07E1Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII-3.93918
Remark[120808 pad] Created as part of an ncRNA dataset from Xiao et al. 2011Paper_evidenceWBPaper00040814
MethodGene