WormBase Tree Display for Gene: WBGene00223091
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| WBGene00223091 | SMap | S_parent | Sequence | Bm_v4_Chr3_scaffold_001 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 6 | |||||||
| Name | CGC_name | Bma-smg-1 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | Bm2830 | ||||||||
| Molecular_name | Bm2830a | ||||||||
| Bm2830a.1 | |||||||||
| BM44459 | |||||||||
| Bm2830b | |||||||||
| BM29185 | |||||||||
| Bm2830c | |||||||||
| BM30782 | |||||||||
| Bm2830b.1 | |||||||||
| Bm2830c.1 | |||||||||
| Bm2830c.2 | |||||||||
| Other_name | Bm-smg-1 | ||||||||
| TAG2830 | Curator_confirmed | WBPerson4055 | |||||||
| Bm1_48115 | Person_evidence | WBPerson5841 | |||||||
| Bm1_48110 | Person_evidence | WBPerson5841 | |||||||
| Public_name | Bma-smg-1 | ||||||||
| Species | Brugia malayi | ||||||||
| History | Version_change | 1 | 10 Dec 2012 14:43:24 | WBPerson4055 | Event | Created | |||
| 2 | 05 Jul 2013 11:43:21 | WBPerson4055 | Name_change | CGC_name | Bma-smg-1 | ||||
| Other_name | Bm-smg-1 | ||||||||
| 3 | 08 Feb 2019 15:42:29 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 4 | 08 May 2019 10:09:27 | WBPerson1983 | Name_change | CGC_name | Bma-smg-1 | ||||
| 5 | 28 May 2021 19:05:20 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 6 | 28 Jul 2021 11:12:29 | WBPerson1983 | Name_change | CGC_name | Bma-smg-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | smg | ||||||||
| RNASeq_FPKM (11) | |||||||||
| GO_annotation | 00239863 | ||||||||
| 00239864 | |||||||||
| 00239865 | |||||||||
| Contained_in_operon | BMOP2147 | ||||||||
| Ortholog (31) | |||||||||
| Paralog | WBGene00221988 | Brugia malayi | From_analysis | WormBase-Compara | |||||
| WBGene00223071 | Brugia malayi | From_analysis | WormBase-Compara | ||||||
| WBGene00225879 | Brugia malayi | From_analysis | WormBase-Compara | ||||||
| WBGene00226925 | Brugia malayi | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in nuclear-transcribed mRNA catabolic process, nonsense-mediated decay and phosphorylation. Is an ortholog of C. elegans smg-1. In C. elegans, smg-1 is involved in male genitalia development; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; and obsolete hermaphrodite genitalia development. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Bm2830a | |||||||
| Bm2830b | |||||||||
| Bm2830c | |||||||||
| Corresponding_transcript | Bm2830a.1 | ||||||||
| Bm2830b.1 | |||||||||
| Bm2830c.1 | |||||||||
| Bm2830c.2 | |||||||||
| Other_sequence | Oden_isotig19084 | ||||||||
| AYC02188_1 | |||||||||
| JI163890.1 | |||||||||
| CSC01836_1 | |||||||||
| Oden_isotig17619 | |||||||||
| Oden_isotig17620 | |||||||||
| JI469438.1 | |||||||||
| FD514278.1 | |||||||||
| Acan_isotig07564 | |||||||||
| AE00740 | |||||||||
| Experimental_info | Expression_cluster | WBPaper00049974:ivermectin_1uM_5-day_downregulated | |||||||
| WBPaper00049974:ivermectin_300nM_48h_downregulated | |||||||||
| WBPaper00051007:downregulated_F120_vs_F30 | |||||||||
| WBPaper00051007:downregulated_M120_vs_F120 | |||||||||
| Remark | [190208 pad] The CGC name Bma-smg-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| [210528 pad] The CGC name Bma-smg-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
