WormBase Tree Display for Gene: WBGene00223517
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WBGene00223517 | SMap | S_parent | Sequence | Bm_v4_Chr2_contig_001 | ||
---|---|---|---|---|---|---|
Identity | Version | 6 | ||||
Name | CGC_name | Bma-ifb-1 | From_analysis | Inferred_from_orthology | ||
Sequence_name | Bm3256 | |||||
Molecular_name | Bm3256a | |||||
Bm3256a.1 | ||||||
BM26414 | ||||||
Bm3256b | ||||||
BM28769 | ||||||
Bm3256b.1 | ||||||
Other_name | Bm-ifb-1 | |||||
TAG3256 | Curator_confirmed | WBPerson4055 | ||||
Bm1_56985A | Curator_confirmed | WBPerson4055 | ||||
Bm1_56990A | Curator_confirmed | WBPerson4055 | ||||
Bm1_56985 | Person_evidence | WBPerson5841 | ||||
Bm1_43615 | Person_evidence | WBPerson5841 | ||||
Bm1_56990 | Person_evidence | WBPerson5841 | ||||
Public_name | Bma-ifb-1 | |||||
Species | Brugia malayi | |||||
History | Version_change (6) | |||||
Status | Live | |||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | ifb | |||||
RNASeq_FPKM (11) | ||||||
Ortholog (36) | ||||||
Paralog | WBGene00223334 | Brugia malayi | From_analysis | WormBase-Compara | ||
WBGene00224169 | Brugia malayi | From_analysis | WormBase-Compara | |||
WBGene00228350 | Brugia malayi | From_analysis | WormBase-Compara | |||
WBGene00232647 | Brugia malayi | From_analysis | WormBase-Compara | |||
Structured_description | Automated_description | Enriched in male based on proteomic studies. Is affected by ivermectin based on RNA-seq studies. Is predicted to encode a protein with the following domains: Lamin tail domain; Intermediate filament, ifa/ifb; Lamin tail domain superfamily; Lamin Tail Domain; Intermediate filament, rod domain; and Intermediate filament protein. Is an ortholog of C. elegans ifb-1. | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | Bm3256a | ||||
Bm3256b | ||||||
Corresponding_transcript | Bm3256a.1 | |||||
Bm3256b.1 | ||||||
Other_sequence (193) | ||||||
Experimental_info | Expression_cluster | WBPaper00041323:male-associated | ||||
WBPaper00045439:BM_Cluster_P2 | ||||||
WBPaper00045439:BM_Cluster_P6 | ||||||
WBPaper00049974:ivermectin_100nM_48h_upregulated | ||||||
WBPaper00051007:upregulated_F120_vs_F30 | ||||||
WBPaper00051007:upregulated_F120_vs_F42 | ||||||
WBPaper00051007:upregulated_M120_vs_F120 | ||||||
WBPaper00051007:upregulated_M120_vs_M30 | ||||||
WBPaper00061765:L3_vs_Adult_Downregulated | ||||||
WBPaper00061765:L4_vs_Micro_Downregulated | ||||||
Reference | WBPaper00045439 | |||||
WBPaper00048750 | ||||||
WBPaper00053967 | ||||||
Remark | [190208 pad] The CGC name Bma-ifb-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||
[210528 pad] The CGC name Bma-ifb-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||
Method | Gene |