WormBase Tree Display for Gene: WBGene00224945
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| WBGene00224945 | SMap | S_parent | Sequence | Bm_v4_ChrX_scaffold_001 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 6 | |||||||
| Name | CGC_name | Bma-mtm-5 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | Bm4684 | ||||||||
| Molecular_name | Bm4684a | ||||||||
| Bm4684a.1 | |||||||||
| BM40854 | |||||||||
| Bm4684b | |||||||||
| BM24053 | |||||||||
| Bm4684b.1 | |||||||||
| Bm4684b.2 | |||||||||
| Other_name | Bm-mtm-5 | ||||||||
| TAG4684 | Curator_confirmed | WBPerson4055 | |||||||
| Bm1_54530A | Curator_confirmed | WBPerson4055 | |||||||
| Bm1_54535A | Curator_confirmed | WBPerson4055 | |||||||
| Bm1_54530 | Person_evidence | WBPerson5841 | |||||||
| Bm1_54535 | Person_evidence | WBPerson5841 | |||||||
| Public_name | Bma-mtm-5 | ||||||||
| Species | Brugia malayi | ||||||||
| History | Version_change | 1 | 10 Dec 2012 14:43:25 | WBPerson4055 | Event | Created | |||
| 2 | 05 Jul 2013 11:43:21 | WBPerson4055 | Name_change | CGC_name | Bma-mtm-5 | ||||
| Other_name | Bm-mtm-5 | ||||||||
| 3 | 08 Feb 2019 15:42:29 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 4 | 08 May 2019 10:09:25 | WBPerson1983 | Name_change | CGC_name | Bma-mtm-5 | ||||
| 5 | 28 May 2021 19:05:21 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 6 | 28 Jul 2021 11:12:28 | WBPerson1983 | Name_change | CGC_name | Bma-mtm-5 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mtm | ||||||||
| RNASeq_FPKM (11) | |||||||||
| Ortholog (25) | |||||||||
| Paralog | WBGene00224541 | Brugia malayi | From_analysis | WormBase-Compara | |||||
| WBGene00226235 | Brugia malayi | From_analysis | WormBase-Compara | ||||||
| WBGene00226755 | Brugia malayi | From_analysis | WormBase-Compara | ||||||
| WBGene00226930 | Brugia malayi | From_analysis | WormBase-Compara | ||||||
| WBGene00227539 | Brugia malayi | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in reproductive tract based on proteomic studies. Is affected by ivermectin based on RNA-seq studies. Is predicted to encode a protein with the following domains: uDENN domain; PH-like domain superfamily; Pleckstrin homology domain; SBF1/SBF2 domain; DENN (AEX-3) domain; Myotubularin-like phosphatase domain; PH domain; GRAM domain; DENN domain, C-terminal lobe; Myotubularin family; Protein kinase C-like, phorbol ester/diacylglycerol-binding domain; dDENN domain; cDENN domain; Protein-tyrosine phosphatase-like; Myotubularin-like, phosphatase domain; Myotubularin protein; and C1-like domain superfamily. Is an ortholog of C. elegans mtm-5. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Bm4684a | |||||||
| Bm4684b | |||||||||
| Corresponding_transcript | Bm4684a.1 | ||||||||
| Bm4684b.1 | |||||||||
| Bm4684b.2 | |||||||||
| Other_sequence (17) | |||||||||
| Experimental_info | Expression_cluster | WBPaper00048706:productive-tract_enriched | |||||||
| WBPaper00049974:ivermectin_300nM_48h_downregulated | |||||||||
| WBPaper00051007:downregulated_F120_vs_F30 | |||||||||
| WBPaper00051007:downregulated_M30_vs_L4 | |||||||||
| WBPaper00051007:downregulated_M120_vs_F120 | |||||||||
| WBPaper00051007:upregulated_F30_vs_L4 | |||||||||
| Reference | WBPaper00045439 | ||||||||
| Remark | [190208 pad] The CGC name Bma-mtm-5 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| [210528 pad] The CGC name Bma-mtm-5 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
