WormBase Tree Display for Gene: WBGene00225291
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| WBGene00225291 | SMap | S_parent | Sequence | Bm_v4_Chr3_scaffold_001 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 6 | |||||||
| Name | CGC_name | Bma-tom-1 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | Bm5030 | ||||||||
| Molecular_name (15) | |||||||||
| Other_name | Bm-tom-1 | ||||||||
| TAG5030 | Curator_confirmed | WBPerson4055 | |||||||
| Bm1_09475A | Curator_confirmed | WBPerson4055 | |||||||
| Bm1_09480A | Curator_confirmed | WBPerson4055 | |||||||
| Bm1_09485A | Curator_confirmed | WBPerson4055 | |||||||
| Bm1_09475 | Person_evidence | WBPerson5841 | |||||||
| Bm1_09485 | Person_evidence | WBPerson5841 | |||||||
| Bm1_09480 | Person_evidence | WBPerson5841 | |||||||
| Public_name | Bma-tom-1 | ||||||||
| Species | Brugia malayi | ||||||||
| History | Version_change | 1 | 10 Dec 2012 14:43:25 | WBPerson4055 | Event | Created | |||
| 2 | 05 Jul 2013 11:43:21 | WBPerson4055 | Name_change | CGC_name | Bma-tom-1 | ||||
| Other_name | Bm-tom-1 | ||||||||
| 3 | 08 Feb 2019 15:42:27 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 4 | 08 May 2019 10:09:25 | WBPerson1983 | Name_change | CGC_name | Bma-tom-1 | ||||
| 5 | 28 May 2021 19:05:20 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 6 | 28 Jul 2021 11:12:29 | WBPerson1983 | Name_change | CGC_name | Bma-tom-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tom | ||||||||
| RNASeq_FPKM (11) | |||||||||
| Contained_in_operon | BMOP2126 | ||||||||
| Ortholog (48) | |||||||||
| Paralog | WBGene00224753 | Brugia malayi | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Is predicted to encode a protein with the following domains: Lethal(2) giant larvae protein; Quinoprotein amine dehydrogenase, beta chain-like; WD domain, G-beta repeat; WD40-repeat-containing domain superfamily; WD40/YVTN repeat-like-containing domain superfamily; WD40 repeat; Lethal giant larvae homologue 2; and LLGL2. Is an ortholog of C. elegans tom-1. In C. elegans, tom-1 is involved in several processes, including regulation of neurotransmitter levels; regulation of synaptic vesicle docking; and regulation of synaptic vesicle priming. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Bm5030a | |||||||
| Bm5030b | |||||||||
| Bm5030c | |||||||||
| Bm5030d | |||||||||
| Bm5030e | |||||||||
| Corresponding_CDS_history | Bm5030a:bm266 | ||||||||
| Bm5030b:bm266 | |||||||||
| Corresponding_transcript | Bm5030a.1 | ||||||||
| Bm5030b.1 | |||||||||
| Bm5030c.1 | |||||||||
| Bm5030d.1 | |||||||||
| Bm5030e.1 | |||||||||
| Other_sequence (38) | |||||||||
| Experimental_info | Expression_cluster | WBPaper00045439:BM_Cluster_P6 | |||||||
| WBPaper00045439:BM_Cluster_P13 | |||||||||
| WBPaper00051007:downregulated_M30_vs_L4 | |||||||||
| WBPaper00051007:downregulated_M120_vs_M30 | |||||||||
| WBPaper00051007:upregulated_F30_vs_L4 | |||||||||
| WBPaper00061765:L4_vs_Micro_Upregulated | |||||||||
| Reference | WBPaper00045439 | ||||||||
| Remark | [190208 pad] The CGC name Bma-tom-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| [210528 pad] The CGC name Bma-tom-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
