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WormBase Tree Display for Gene: WBGene00225939

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Name Class

WBGene00225939SMapS_parentSequenceBm_v4_Chr3_scaffold_001
IdentityVersion4
NameSequence_nameBm5678
Molecular_nameBm5678a
Bm5678a.1
BM42244
Bm5678b
BM46534
Bm5678b.1
Other_nameTAG5678Curator_confirmedWBPerson4055
TAG12496
TAG12497
TAG12498
Bm1_50075Person_evidenceWBPerson5841
Public_nameBm5678
SpeciesBrugia malayi
HistoryVersion_change110 Dec 2012 14:43:25WBPerson4055EventCreated
209 Oct 2015 09:28:24WBPerson4055EventAcquires_mergeWBGene00232757
309 Oct 2015 09:28:24WBPerson4055EventAcquires_mergeWBGene00232758
409 Oct 2015 09:28:24WBPerson4055EventAcquires_mergeWBGene00232759
Acquires_mergeWBGene00232757
WBGene00232758
WBGene00232759
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKM (11)
Contained_in_operonBMOP2181
Ortholog (33)
ParalogWBGene00222645Brugia malayiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs affected by ivermectin based on RNA-seq studies. Is predicted to encode a protein with the following domains: Vacuolar-sorting-associated 13 protein C-terminal; Vacuolar protein sorting-associated protein 13-like, N-terminal domain; Repeating coiled region of VPS13; N-terminal region of Chorein or VPS13; Vacuolar protein sorting-associated protein 13, second N-terminal domain; VPS13, repeated coiled region; Vacuolar protein sorting-associated protein 13, VPS13 adaptor binding domain; Vacuolar protein sorting-associated protein 13; Vacuolar protein sorting-associated protein 13, C-terminal; SHR-binding domain of vacuolar-sorting associated protein 13; and Vacuolar sorting-associated protein 13, N-terminal. Is an ortholog of C. elegans T08G11.1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSBm5678a
Bm5678b
Corresponding_transcriptBm5678a.1
Bm5678b.1
Other_sequence (56)
Experimental_infoExpression_clusterWBPaper00049974:ivermectin_300nM_48h_downregulated
WBPaper00051007:downregulated_M120_vs_F120
WBPaper00051007:upregulated_F120_vs_F30
WBPaper00051007:upregulated_M120_vs_M30
WBPaper00051007:upregulated_M120_vs_M42
MethodGene