WormBase Tree Display for Gene: WBGene00227129
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WBGene00227129 | SMap | S_parent | Sequence | Bm_v4_Chr1_scaffold_001 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 6 | |||||||
Name | CGC_name | Bma-ntl-3 | From_analysis | Inferred_from_orthology | |||||
Sequence_name | Bm6868 | ||||||||
Molecular_name | Bm6868a | ||||||||
Bm6868a.1 | |||||||||
BM48472 | |||||||||
Bm6868b | |||||||||
BM27060 | |||||||||
Bm6868c | |||||||||
BM48340 | |||||||||
Bm6868b.1 | |||||||||
Bm6868c.1 | |||||||||
Other_name | Bm-ntl-3 | ||||||||
TAG6868 | Curator_confirmed | WBPerson4055 | |||||||
Bm1_02460A | Curator_confirmed | WBPerson4055 | |||||||
Bm1_02460 | Person_evidence | WBPerson5841 | |||||||
Public_name | Bma-ntl-3 | ||||||||
Species | Brugia malayi | ||||||||
History | Version_change | 1 | 10 Dec 2012 14:43:25 | WBPerson4055 | Event | Created | |||
2 | 05 Jul 2013 11:43:21 | WBPerson4055 | Name_change | CGC_name | Bma-ntl-3 | ||||
Other_name | Bm-ntl-3 | ||||||||
3 | 08 Feb 2019 15:42:29 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
4 | 08 May 2019 10:09:23 | WBPerson1983 | Name_change | CGC_name | Bma-ntl-3 | ||||
5 | 28 May 2021 19:05:20 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
6 | 28 Jul 2021 11:12:28 | WBPerson1983 | Name_change | CGC_name | Bma-ntl-3 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | ntl | ||||||||
RNASeq_FPKM (11) | |||||||||
GO_annotation | 00245676 | ||||||||
00245677 | |||||||||
00245678 | |||||||||
Contained_in_operon | BMOP1766 | ||||||||
Ortholog (35) | |||||||||
Paralog | WBGene00222002 | Brugia malayi | From_analysis | WormBase-Compara | |||||
WBGene00228639 | Brugia malayi | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Predicted to be part of CCR4-NOT core complex. Is an ortholog of C. elegans ntl-3. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Bm6868a | |||||||
Bm6868b | |||||||||
Bm6868c | |||||||||
Corresponding_CDS_history | Bm6868a:bm271 | ||||||||
Bm6868c:bm271 | |||||||||
Bm6868d:bm271 | |||||||||
Corresponding_transcript | Bm6868a.1 | ||||||||
Bm6868b.1 | |||||||||
Bm6868c.1 | |||||||||
Other_sequence (68) | |||||||||
Experimental_info | Expression_cluster | WBPaper00048706:productive-tract_enriched | |||||||
WBPaper00051007:downregulated_F120_vs_F30 | |||||||||
WBPaper00051007:downregulated_M120_vs_F120 | |||||||||
WBPaper00051007:upregulated_M42_vs_F42 | |||||||||
WBPaper00051007:upregulated_M42_vs_M30 | |||||||||
WBPaper00051007:upregulated_M120_vs_M42 | |||||||||
WBPaper00061765:L4_vs_Adult_Upregulated | |||||||||
Reference | WBPaper00045439 | ||||||||
Remark | [190208 pad] The CGC name Bma-ntl-3 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
[210528 pad] The CGC name Bma-ntl-3 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
Method | Gene |