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WormBase Tree Display for Gene: WBGene00227358

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Name Class

WBGene00227358SMapS_parentSequenceBm_v4_ChrX_scaffold_001
IdentityVersion7
NameCGC_nameBma-shl-1From_analysisInferred_from_orthology
Sequence_nameBm7097
Molecular_nameBm7097a
Bm7097a.1
BM42721
Bm7097b
BM26322
Bm7097b.1
Other_nameTAG7097Curator_confirmedWBPerson4055
Bm1_12345ACurator_confirmedWBPerson4055
TAG7359
Bm1_12070ACurator_confirmedWBPerson4055
Bm1_12345Person_evidenceWBPerson5841
Bm1_12070Person_evidenceWBPerson5841
Public_nameBma-shl-1
SpeciesBrugia malayi
HistoryVersion_change110 Dec 2012 14:43:25WBPerson4055EventCreated
224 Mar 2014 11:31:07WBPerson4055Name_changeCGC_nameBma-shl-1
302 Dec 2015 10:31:22WBPerson4055EventAcquires_mergeWBGene00227620
408 Feb 2019 15:42:29WBPerson1983Name_changeCGC_nameRemoved
508 May 2019 10:09:26WBPerson1983Name_changeCGC_nameBma-shl-1
628 May 2021 19:05:21WBPerson1983Name_changeCGC_nameRemoved
728 Jul 2021 11:12:29WBPerson1983Name_changeCGC_nameBma-shl-1
Acquires_mergeWBGene00227620
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classshl
RNASeq_FPKM (11)
GO_annotation00245993
00245994
00245995
00245996
00245997
00245998
00245999
00246000
Ortholog (32)
ParalogWBGene00222625Brugia malayiFrom_analysisWormBase-Compara
WBGene00222940Brugia malayiFrom_analysisWormBase-Compara
WBGene00223582Brugia malayiFrom_analysisWormBase-Compara
WBGene00223636Brugia malayiFrom_analysisWormBase-Compara
WBGene00226896Brugia malayiFrom_analysisWormBase-Compara
WBGene00227932Brugia malayiFrom_analysisWormBase-Compara
WBGene00228047Brugia malayiFrom_analysisWormBase-Compara
WBGene00228905Brugia malayiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable voltage-gated potassium channel activity. Predicted to be involved in potassium ion transport; protein homooligomerization; and transmembrane transport. Predicted to be located in membrane. Predicted to be part of voltage-gated potassium channel complex. Is an ortholog of C. elegans shl-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSBm7097a
Bm7097b
Corresponding_transcriptBm7097a.1
Bm7097b.1
Other_sequence (40)
Experimental_infoExpression_clusterWBPaper00045439:BM_Cluster_P6
WBPaper00045439:BM_Cluster_P9
WBPaper00051007:downregulated_M30_vs_L4
WBPaper00051007:upregulated_F120_vs_F30
WBPaper00051007:upregulated_F120_vs_F42
WBPaper00051007:upregulated_M120_vs_F120
WBPaper00061765:Adult_vs_Micro_Upregulated
WBPaper00061765:L3_vs_Adult_Downregulated
WBPaper00061765:L4_vs_Adult_Downregulated
ReferenceWBPaper00045439
Remark[190208 pad] The CGC name Bma-shl-1 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Bma-shl-1 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene