WormBase Tree Display for Gene: WBGene00228563
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| WBGene00228563 | SMap | S_parent | Sequence | Bm_v4_ChrX_scaffold_001 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 6 | |||||||
| Name | CGC_name | Bma-sox-4 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | Bm8302 | ||||||||
| Molecular_name | Bm8302 | ||||||||
| Bm8302.1 | |||||||||
| BM45074 | |||||||||
| Other_name | Bm-sox-4 | ||||||||
| TAG8302 | Curator_confirmed | WBPerson4055 | |||||||
| Bm1_10200A | Curator_confirmed | WBPerson4055 | |||||||
| Bm1_10200 | Person_evidence | WBPerson5841 | |||||||
| Public_name | Bma-sox-4 | ||||||||
| Species | Brugia malayi | ||||||||
| History | Version_change | 1 | 10 Dec 2012 14:43:25 | WBPerson4055 | Event | Created | |||
| 2 | 05 Jul 2013 11:43:21 | WBPerson4055 | Name_change | CGC_name | Bma-sox-4 | ||||
| Other_name | Bm-sox-4 | ||||||||
| 3 | 08 Feb 2019 15:42:28 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 4 | 08 May 2019 10:09:26 | WBPerson1983 | Name_change | CGC_name | Bma-sox-4 | ||||
| 5 | 28 May 2021 19:05:20 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 6 | 28 Jul 2021 11:12:29 | WBPerson1983 | Name_change | CGC_name | Bma-sox-4 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sox | ||||||||
| RNASeq_FPKM (11) | |||||||||
| Ortholog (25) | |||||||||
| Paralog | WBGene00222425 | Brugia malayi | From_analysis | WormBase-Compara | |||||
| WBGene00222782 | Brugia malayi | From_analysis | WormBase-Compara | ||||||
| WBGene00223033 | Brugia malayi | From_analysis | WormBase-Compara | ||||||
| WBGene00224219 | Brugia malayi | From_analysis | WormBase-Compara | ||||||
| WBGene00226173 | Brugia malayi | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Is predicted to encode a protein with the following domains: HMG (high mobility group) box; High mobility group box domain superfamily; and High mobility group box domain. Is an ortholog of C. elegans sox-4. In C. elegans, sox-4 is involved in innate immune response. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Bm8302 | |||||||
| Corresponding_transcript | Bm8302.1 | ||||||||
| Other_sequence (29) | |||||||||
| Experimental_info | Expression_cluster | WBPaper00045439:BM_Cluster_P6 | |||||||
| WBPaper00051007:downregulated_M120_vs_F120 | |||||||||
| WBPaper00061765:L3_vs_Adult_Upregulated | |||||||||
| WBPaper00061765:L4_vs_Adult_Upregulated | |||||||||
| WBPaper00061765:L4_vs_Micro_Upregulated | |||||||||
| Reference | WBPaper00045439 | ||||||||
| Remark | [190208 pad] The CGC name Bma-sox-4 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| [210528 pad] The CGC name Bma-sox-4 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
