WormBase Tree Display for Gene: WBGene00229513
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WBGene00229513 | SMap | S_parent | Sequence | Bm_v4_ChrX_scaffold_001 | ||
---|---|---|---|---|---|---|
Identity (5) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | zmp | |||||
RNASeq_FPKM (11) | ||||||
GO_annotation | 00247689 | |||||
00247690 | ||||||
00247691 | ||||||
00247692 | ||||||
00247693 | ||||||
Ortholog (32) | ||||||
Paralog | WBGene00222755 | Brugia malayi | From_analysis | WormBase-Compara | ||
WBGene00224918 | Brugia malayi | From_analysis | WormBase-Compara | |||
WBGene00224951 | Brugia malayi | From_analysis | WormBase-Compara | |||
WBGene00226152 | Brugia malayi | From_analysis | WormBase-Compara | |||
WBGene00226519 | Brugia malayi | From_analysis | WormBase-Compara | |||
WBGene00226974 | Brugia malayi | From_analysis | WormBase-Compara | |||
Structured_description | Automated_description | Predicted to enable metalloendopeptidase activity and zinc ion binding activity. Predicted to be involved in proteolysis. Predicted to be located in extracellular matrix. Is an ortholog of C. elegans zmp-1. In C. elegans, zmp-1 is involved in basement membrane disassembly. | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | Bm9252 | ||||
Corresponding_transcript | Bm9252.1 | |||||
Other_sequence | JI239126.1 | |||||
FC818239.1 | ||||||
GE639376.1 | ||||||
BMC10914_1 | ||||||
Experimental_info | Expression_cluster | WBPaper00045439:BM_Cluster_P12 | ||||
WBPaper00051007:upregulated_F120_vs_F30 | ||||||
WBPaper00051007:upregulated_M120_vs_F120 | ||||||
WBPaper00061765:L3_vs_Adult_Downregulated | ||||||
WBPaper00061765:L4_vs_Adult_Downregulated | ||||||
Reference | WBPaper00045439 | |||||
Remark | [190208 pad] The CGC name Bma-zmp-5 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||
[191001 pad] The CGC name Bma-zmp-5 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||
Method | Gene |