WormBase Tree Display for Gene: WBGene00231318
expand all nodes | collapse all nodes | view schema
WBGene00231318 | SMap | S_parent | Sequence | Bm_v4_Chr4_scaffold_001 | ||
---|---|---|---|---|---|---|
Identity | Version | 8 | ||||
Name | Sequence_name | Bm11057 | ||||
Molecular_name | Bm11057a | |||||
Bm11057a.1 | ||||||
BM42573 | ||||||
Bm11057b | ||||||
BM39779 | ||||||
Bm11057b.1 | ||||||
Other_name | TAG11057 | Curator_confirmed | WBPerson4055 | |||
Bm1_25535A | Curator_confirmed | WBPerson4055 | ||||
Bm1_25540A | Curator_confirmed | WBPerson4055 | ||||
TAG12072 | ||||||
TAG12073 | ||||||
TAG12076 | ||||||
Bm1_25535 | Person_evidence | WBPerson5841 | ||||
Bm1_25540 | Person_evidence | WBPerson5841 | ||||
Public_name | Bm11057 | |||||
Species | Brugia malayi | |||||
History (2) | ||||||
Status | Live | |||||
Gene_info | Biotype | SO:0001217 | ||||
RNASeq_FPKM (11) | ||||||
Ortholog | OTIPU.nOt.2.0.1.g03177 | Oscheius tipulae | From_analysis | WormBase-Compara | ||
OTIPU.nOt.2.0.1.g03178 | Oscheius tipulae | From_analysis | WormBase-Compara | |||
Pan_g23680 | Panagrellus redivivus | From_analysis | WormBase-Compara | |||
WBGene00115853 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||
WBGene00249069 | Onchocerca volvulus | From_analysis | WormBase-Compara | |||
WBGene00261126 | Strongyloides ratti | From_analysis | WormBase-Compara | |||
Structured_description | Automated_description | Enriched in reproductive tract based on proteomic studies. Is affected by ivermectin based on RNA-seq studies. Is predicted to encode a protein with the following domains: ELYS, beta-propeller domain and beta-propeller of ELYS nucleoporin. Is an ortholog of O. volvulus Ovo-mel-28. | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | Bm11057a | ||||
Bm11057b | ||||||
Corresponding_transcript | Bm11057a.1 | |||||
Bm11057b.1 | ||||||
Other_sequence | JI473887.1 | |||||
JI476185.1 | ||||||
JI478284.1 | ||||||
JI473761.1 | ||||||
JI483120.1 | ||||||
JI475905.1 | ||||||
JI459981.1 | ||||||
JI466841.1 | ||||||
JI480767.1 | ||||||
Experimental_info | Expression_cluster | WBPaper00048706:productive-tract_enriched | ||||
WBPaper00049974:ivermectin_100nM_24h_upregulated | ||||||
WBPaper00051007:downregulated_F120_vs_F30 | ||||||
WBPaper00051007:downregulated_M120_vs_F120 | ||||||
WBPaper00051007:upregulated_F30_vs_L4 | ||||||
WBPaper00051007:upregulated_M30_vs_F30 | ||||||
WBPaper00051007:upregulated_M120_vs_M30 | ||||||
WBPaper00051007:upregulated_M120_vs_M42 | ||||||
WBPaper00061765:L3_vs_Adult_Upregulated | ||||||
WBPaper00061765:L4_vs_Adult_Upregulated | ||||||
Reference | WBPaper00045439 | |||||
Remark | [190208 pad] The CGC name Bma-mel-28 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||
[210528 pad] The CGC name Bma-mel-28 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||
Method | Gene |