WormBase Tree Display for Gene: WBGene00233219
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| WBGene00233219 | SMap | S_parent | Sequence | Bm_v4_Chr3_scaffold_001 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 6 | |||||||
| Name | CGC_name | Bma-aptf-1 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | Bm12958 | ||||||||
| Molecular_name | Bm12958 | ||||||||
| Bm12958.1 | |||||||||
| BM27410 | |||||||||
| Other_name | TAG12958 | Curator_confirmed | WBPerson4055 | ||||||
| Bm1_49980 | Person_evidence | WBPerson5841 | |||||||
| Bm1_49985 | Person_evidence | WBPerson5841 | |||||||
| Public_name | Bma-aptf-1 | ||||||||
| Species | Brugia malayi | ||||||||
| History | Version_change | 1 | 10 Dec 2012 14:43:26 | WBPerson4055 | Event | Created | |||
| 2 | 24 Mar 2014 11:31:06 | WBPerson4055 | Name_change | CGC_name | Bma-aptf-1 | ||||
| 3 | 08 Feb 2019 15:42:29 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 4 | 08 May 2019 10:09:25 | WBPerson1983 | Name_change | CGC_name | Bma-aptf-1 | ||||
| 5 | 28 May 2021 19:05:21 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 6 | 28 Jul 2021 11:12:29 | WBPerson1983 | Name_change | CGC_name | Bma-aptf-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | aptf | ||||||||
| RNASeq_FPKM (11) | |||||||||
| GO_annotation | 00249247 | ||||||||
| 00249248 | |||||||||
| 00249249 | |||||||||
| Ortholog (30) | |||||||||
| Paralog | WBGene00225093 | Brugia malayi | From_analysis | WormBase-Compara | |||||
| WBGene00229900 | Brugia malayi | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Is an ortholog of C. elegans aptf-1. In C. elegans, aptf-1 is involved in positive regulation of transcription by RNA polymerase II and sleep. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Bm12958 | |||||||
| Corresponding_CDS_history | Bm12958a:bm266 | ||||||||
| Corresponding_transcript | Bm12958.1 | ||||||||
| Other_sequence | EX541442.1 | ||||||||
| JI481960.1 | |||||||||
| Oden_isotig23760 | |||||||||
| JI171214.1 | |||||||||
| MHC00152_1 | |||||||||
| Dviv_isotig26540 | |||||||||
| JI168557.1 | |||||||||
| Acan_isotig12470 | |||||||||
| MH03061 | |||||||||
| Experimental_info | Expression_cluster | WBPaper00051007:downregulated_F120_vs_F30 | |||||||
| WBPaper00051007:downregulated_M120_vs_F120 | |||||||||
| WBPaper00061765:L3_vs_Adult_Upregulated | |||||||||
| WBPaper00061765:L4_vs_Adult_Upregulated | |||||||||
| Remark | [190208 pad] The CGC name Bma-aptf-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| [210528 pad] The CGC name Bma-aptf-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
