WormBase Tree Display for Gene: WBGene00236987

WBGene00236987 SMap: S_parent: Sequence: OVOC_OM1b_5
  Identity: Version: 2
    Name: CGC_name: Ovo-nhr-49 From_analysis: Inferred_from_orthology
      Sequence_name: OVOC178
      Molecular_name: OVOC178
        OVOC178.1
        OVP11588
      Public_name: Ovo-nhr-49
    Species: Onchocerca volvulus
    History: Version_change: 1 29 Nov 2013 15:05:32 WBPerson3111 Event: Imported: MAKER import
        2 24 Jan 2014 16:01:34 WBPerson4055 Name_change: CGC_name: Ovo-nhr-49
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nhr
    RNASeq_FPKM: WBls:0000101 12.4335 From_analysis: RNASeq.ovolvulus.total_over_all_stages.control_mean
        9.21659 From_analysis: RNASeq.ovolvulus.total_over_all_stages.control_median
      WBls:0000104 (16)
      WBls:0000107 7.67958 From_analysis: RNASeq.ovolvulus.WBls:0000107.control_mean
            RNASeq.ovolvulus.WBls:0000107.control_median
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
      WBls:0000108 11.6507 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
        27.4614 From_analysis: RNASeq.ovolvulus.WBls:0000108.control_mean
        33.2905 From_analysis: RNASeq.ovolvulus.WBls:0000108.control_median
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
        37.4431 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
      WBls:0000664 25.1132 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
        25.4697 From_analysis: RNASeq.ovolvulus.WBls:0000664.control_mean
            RNASeq.ovolvulus.WBls:0000664.control_median
        25.8262 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
    GO_annotation: 00250762
      00250763
      00250764
      00250765
    Ortholog (30)
    Paralog (11)
    Structured_description: Automated_description: Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-49. In C. elegans, nhr-49 is involved in determination of adult lifespan; positive regulation of transcription from RNA polymerase II promoter in response to stress; and regulation of fatty acid metabolic process. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: OVOC178
    Corresponding_transcript: OVOC178.1
    Other_sequence (65)
  Method: Gene