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WormBase Tree Display for Gene: WBGene00237102

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Name Class

WBGene00237102SMapS_parentSequenceOVOC_OM1b_7
IdentityVersion2
NameCGC_nameOvo-tax-2From_analysisInferred_from_orthology
Sequence_nameOVOC293
Molecular_nameOVOC293
OVOC293.1
OVP04599
Public_nameOvo-tax-2
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:32WBPerson3111EventImportedMAKER import
224 Jan 2014 16:01:34WBPerson4055Name_changeCGC_nameOvo-tax-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classtax
RNASeq_FPKMWBls:00001011.43946From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
2.62825From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
WBls:00001040.449345From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450840
0.535829From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529045
0.54696From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529044
0.856252From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978157
1.00301From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978156
1.26292From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.SRP056861.SRX978162
13.0097From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.ERP001350.ERX200394
1.68372From_analysisRNASeq.ovolvulus.WBls:0000104.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978161
1.97197From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978159
0From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450842
3.07744From_analysisRNASeq.ovolvulus.WBls:0000104.control_mean
3.87307From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978163
4.10896From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450841
4.11325From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978160
5.06629From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978164
7.68029From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978158
WBls:00001070.842666From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:00001080.519938From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
1.13295From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
1.37583From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
1.50309From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
WBls:00006642.89668From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
3.70917From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
4.52165From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
GO_annotation00250893
00250894
00250895
00250896
OrthologWBGene00033375Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00224134Brugia malayiFrom_analysisWormBase-Compara
WBGene00006525Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00135117Caenorhabditis japonicaFrom_analysisWormBase-Compara
CBOVI.g10279Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g1584Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g20157Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g20159Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g14392Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g6761Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g7636Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP38.g11395Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g11396Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g15273Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g24194Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00152.g5711Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-tax-2Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_I.g2142Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold459.g1452Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00218.g7311Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_05136Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_002466Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_002468Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g05787Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g15758Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_10117200Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00059947Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00086104Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00096989Pristionchus pacificusFrom_analysisWormBase-Compara
chrI_pilon.g1729Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00259527Strongyloides rattiFrom_analysisWormBase-Compara
ParalogWBGene00241358Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00243632Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00244951Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00244980Onchocerca volvulusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable monoatomic ion channel activity. Predicted to be involved in monoatomic ion transport and transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans tax-2. In C. elegans, tax-2 is involved in several processes, including G protein-coupled receptor signaling pathway coupled to cGMP nucleotide second messenger; negative regulation of cGMP-mediated signaling; and positive regulation of macromolecule biosynthetic process.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC293
Corresponding_transcriptOVOC293.1
Other_sequenceJI477890.1
MJ04033
GR13450
GRC02636_1
MI05759
MIC05059_1
HG04952
Oden_isotig25420
Acan_isotig09970
FC543892.1
MIC04900_1
ACC24190_1
Dviv_isotig16168
MI04999
HGC11908_1
MJC03166_1
JI169481.1
Dviv_isotig16169
JO469942.1
JI459862.1
NBC04430_1
MethodGene