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WormBase Tree Display for Gene: WBGene00237139

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Name Class

WBGene00237139SMapS_parentSequenceOVOC_OM1b_7
IdentityVersion2
NameCGC_nameOvo-csn-2From_analysisInferred_from_orthology
Sequence_nameOVOC330
Molecular_nameOVOC330
OVOC330.1
OVP02942
Public_nameOvo-csn-2
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:32WBPerson3111EventImportedMAKER import
224 Jan 2014 16:01:33WBPerson4055Name_changeCGC_nameOvo-csn-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcsn
RNASeq_FPKMWBls:000010118.9742From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
8.02524From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
WBls:0000104 (16)
WBls:000010711.1462From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010822.8987From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
29.6008From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
30.518From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
35.3856From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
WBls:000066447.101From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
50.9918From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
54.8826From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
Ortholog (41)
ParalogWBGene00245106Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00245502Onchocerca volvulusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Proteasome component (PCI) domain; Winged helix DNA-binding domain superfamily; PCI domain; and COP9 signalosome complex subunit 2. Is an ortholog of C. elegans csn-2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC330
Corresponding_transcriptOVOC330.1
Other_sequence (66)
MethodGene