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WormBase Tree Display for Gene: WBGene00237151

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Name Class

WBGene00237151SMapS_parentSequenceOVOC_OM1b_7
IdentityVersion1
NameSequence_nameOVOC342
Molecular_nameOVOC342
OVOC342.1
OVP13068
Public_nameOVOC342
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:32WBPerson3111EventImportedMAKER import
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000010150.0415From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
87.4925From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
WBls:0000104104.792From_analysisRNASeq.ovolvulus.WBls:0000104.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.ERP001350.ERX200394
127.349From_analysisRNASeq.ovolvulus.WBls:0000104.control_mean
160.313From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978160
180.168From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978161
193.414From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978157
195.616From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978159
237.442From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978156
265.475From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978158
284.203From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978163
30.7539From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450842
32.3618From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529045
45.9197From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450840
54.1633From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450841
58.3394From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978164
6.0446From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.SRP056861.SRX978162
61.2297From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529044
WBls:00001071.90351From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:00001081.32551From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
4.00388From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
4.19903From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
7.26771From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
WBls:00006640.033615From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
0.049899From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
0.066182From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
GO_annotation00250967
00250968
00250969
00250970
00250971
OrthologWBGene00151479Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00191203Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00030647Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00222230Brugia malayiFrom_analysisWormBase-Compara
WBGene00000239Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00015467Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00119653Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00121481Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00134372Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00208948Caenorhabditis japonicaFrom_analysisWormBase-Compara
CBOVI.g4304Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g14167Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g1963Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g20744Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g9610Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g9611Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g15157Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g15158Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g14110Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g14111Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g15964Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g15965Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g7280Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g20270Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g20271Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g10001Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g10002Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g19693Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g6486Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g6939Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g6941Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g6942Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g7138Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00064.g3152Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00850.g14551Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_10809.g22876Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_III.g9442Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold626.g6373Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00346.g9842Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_01687.g22531Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_03344.g29880Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_09744.g39646Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_06068Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_18517Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_18518Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_006042Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_010581Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_010582Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g08389Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g08390Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g10059Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30131900Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00055635Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00055636Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00057352Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00091970Pristionchus pacificusFrom_analysisWormBase-Compara
chrIII_pilon.g7752Caenorhabditis elegansFrom_analysisWormBase-Compara
chrIII_pilon.g7753Caenorhabditis elegansFrom_analysisWormBase-Compara
chrII_pilon.g4512Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00260225Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00296350Trichuris murisFrom_analysisWormBase-Compara
WBGene00296355Trichuris murisFrom_analysisWormBase-Compara
WBGene00296356Trichuris murisFrom_analysisWormBase-Compara
WBGene00298321Trichuris murisFrom_analysisWormBase-Compara
WBGene00301048Trichuris murisFrom_analysisWormBase-Compara
WBGene00301049Trichuris murisFrom_analysisWormBase-Compara
WBGene00301050Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00240996Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00241267Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00241747Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246178Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00247592Onchocerca volvulusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable carboxy-lyase activity and pyridoxal phosphate binding activity. Predicted to be involved in amino acid metabolic process. Is an ortholog of C. elegans bas-1 and basl-1. In C. elegans, bas-1 is involved in several processes, including locomotion involved in locomotory behavior; phenol-containing compound biosynthetic process; and reproductive behavior.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC342
Corresponding_CDS_historyOVOC342:ov242
Corresponding_transcriptOVOC342.1
Other_sequenceAI205362.1
AW888312.1
OVC02397_1
OVC06037_1
JI473221.1
HGC04590_1
JI462657.1
MI06384
JI482292.1
MCC03406_1
Acan_isotig10197
JI174135.1
CD374586.1
HC03132
JO469047.1
OFC00626_1
AE03218
ALC01093_1
FK802391.1
HCC01285_1
Tcir_isotig19523
EX008719.1
MIC05382_1
Hbac_isotig03510
CD374585.1
HBC04819_1
EX550433.1
MC04267
WBC00494
ACC11033_1
OF01351
HG01004
BQ834007.2
ES743715.1
BQ834006.2
MethodGene