WormBase Tree Display for Gene: WBGene00237271

WBGene00237271 SMap: S_parent: Sequence: OVOC_OM1b_7
  Identity: Version: 2
    Name: CGC_name: Ovo-aptf-1 From_analysis: Inferred_from_orthology
      Sequence_name: OVOC462
      Molecular_name: OVOC462
        OVOC462.1
        OVP07081
      Public_name: Ovo-aptf-1
    Species: Onchocerca volvulus
    History: Version_change: 1 29 Nov 2013 15:05:32 WBPerson3111 Event: Imported: MAKER import
        2 24 Jan 2014 16:01:34 WBPerson4055 Name_change: CGC_name: Ovo-aptf-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: aptf
    RNASeq_FPKM: WBls:0000101 0.146548 From_analysis: RNASeq.ovolvulus.total_over_all_stages.control_median
        0.64074 From_analysis: RNASeq.ovolvulus.total_over_all_stages.control_mean
      WBls:0000104 0.070112 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529044
        0.137485 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.ERP001350.ERX200394
        0.155612 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978159
        0.193193 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450840
        0.199627 From_analysis: RNASeq.ovolvulus.WBls:0000104.control_mean
        0.247075 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450841
        1.00337 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978164
        1.18756 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978163
        0 From_analysis: RNASeq.ovolvulus.WBls:0000104.control_median
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450842
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529045
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978156
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978157
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978158
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978160
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978161
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.SRP056861.SRX978162
      WBls:0000107 0.90987 From_analysis: RNASeq.ovolvulus.WBls:0000107.control_mean
            RNASeq.ovolvulus.WBls:0000107.control_median
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
      WBls:0000108 0.286387 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
        1.83603 From_analysis: RNASeq.ovolvulus.WBls:0000108.control_mean
        2.27467 From_analysis: RNASeq.ovolvulus.WBls:0000108.control_median
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
        2.94702 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
      WBls:0000664 1.29167 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
        2.34196 From_analysis: RNASeq.ovolvulus.WBls:0000664.control_mean
            RNASeq.ovolvulus.WBls:0000664.control_median
        3.39226 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
    GO_annotation: 00251127
      00251128
      00251129
    Ortholog (30)
    Paralog: WBGene00238500 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00241056 Onchocerca volvulus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable DNA-binding transcription factor activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Is an ortholog of C. elegans aptf-1. In C. elegans, aptf-1 is involved in positive regulation of transcription by RNA polymerase II and sleep. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: OVOC462
    Corresponding_transcript: OVOC462.1
    Other_sequence (12)
  Method: Gene