WormBase Tree Display for Gene: WBGene00237427

WBGene00237427 SMap: S_parent: Sequence: OVOC_OM1b_7
  Identity: Version: 2
    Name: CGC_name: Ovo-let-381 From_analysis: Inferred_from_orthology
      Sequence_name: OVOC618
      Molecular_name: OVOC618
        OVOC618.1
        OVP05680
        OVOC618.2
      Public_name: Ovo-let-381
    Species: Onchocerca volvulus
    History: Version_change: 1 29 Nov 2013 15:05:32 WBPerson3111 Event: Imported: MAKER import
        2 24 Jan 2014 16:01:33 WBPerson4055 Name_change: CGC_name: Ovo-let-381
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: let
    RNASeq_FPKM: WBls:0000101 0.065292 From_analysis: RNASeq.ovolvulus.total_over_all_stages.control_median
        0.790084 From_analysis: RNASeq.ovolvulus.total_over_all_stages.control_mean
      WBls:0000104 0.027266 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.ERP001350.ERX200394
        0.028247 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978157
        0.102336 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978156
        0.153119 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450840
        0.195849 From_analysis: RNASeq.ovolvulus.WBls:0000104.control_mean
        0.282591 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529044
        0.53384 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978163
        1.81034 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978164
        0 From_analysis: RNASeq.ovolvulus.WBls:0000104.control_median
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450841
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450842
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529045
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978158
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978159
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978160
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978161
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.SRP056861.SRX978162
      WBls:0000107 2.3904 From_analysis: RNASeq.ovolvulus.WBls:0000107.control_mean
            RNASeq.ovolvulus.WBls:0000107.control_median
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
      WBls:0000108 1.31993 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
        2.14511 From_analysis: RNASeq.ovolvulus.WBls:0000108.control_mean
        2.17696 From_analysis: RNASeq.ovolvulus.WBls:0000108.control_median
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
        2.93845 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
      WBls:0000664 2.06917 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
        2.80919 From_analysis: RNASeq.ovolvulus.WBls:0000664.control_mean
            RNASeq.ovolvulus.WBls:0000664.control_median
        3.5492 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
    GO_annotation: 00251308
      00251309
      00251310
    Ortholog (29)
    Paralog (11)
    Structured_description: Automated_description: Predicted to enable DNA-binding transcription factor activity and sequence-specific DNA binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans let-381. In C. elegans, let-381 is involved in mesodermal cell fate specification; nematode larval development; and positive regulation of mesodermal cell fate specification. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: OVOC618
    Corresponding_transcript: OVOC618.1
      OVOC618.2
    Other_sequence: Dviv_isotig25947
      Acan_isotig02194
      JI173213.1
      Oden_isotig23420
  Method: Gene