WormBase Tree Display for Gene: WBGene00240587

WBGene00240587 SMap: S_parent: Sequence: OVOC_OM1b_209
  Identity: Version: 2
    Name: CGC_name: Ovo-sox-3 From_analysis: Inferred_from_orthology
      Sequence_name: OVOC3778
      Molecular_name: OVOC3778
        OVOC3778.1
        OVP08208
        OVOC3778.2
      Public_name: Ovo-sox-3
    Species: Onchocerca volvulus
    History: Version_change: 1 29 Nov 2013 15:05:33 WBPerson3111 Event: Imported: MAKER import
        2 24 Jan 2014 16:01:34 WBPerson4055 Name_change: CGC_name: Ovo-sox-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: sox
    RNASeq_FPKM: WBls:0000101 5.29848 From_analysis: RNASeq.ovolvulus.total_over_all_stages.control_median
        6.37533 From_analysis: RNASeq.ovolvulus.total_over_all_stages.control_mean
      WBls:0000104 (16)
      WBls:0000107 8.92719 From_analysis: RNASeq.ovolvulus.WBls:0000107.control_mean
            RNASeq.ovolvulus.WBls:0000107.control_median
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
      WBls:0000108 11.2767 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
        14.8736 From_analysis: RNASeq.ovolvulus.WBls:0000108.control_mean
        15.6175 From_analysis: RNASeq.ovolvulus.WBls:0000108.control_median
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
        17.7265 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
      WBls:0000664 1.10326 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
        1.25821 From_analysis: RNASeq.ovolvulus.WBls:0000664.control_mean
            RNASeq.ovolvulus.WBls:0000664.control_median
        1.41316 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
    Ortholog (28)
    Paralog: WBGene00237571 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00238744 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00240468 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00241896 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00242319 Onchocerca volvulus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: HMG (high mobility group) box; High mobility group box domain superfamily; and High mobility group box domain. Is an ortholog of C. elegans sox-3. In C. elegans, sox-3 is involved in neuron differentiation. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: OVOC3778
    Corresponding_transcript: OVOC3778.1
      OVOC3778.2
    Other_sequence (531)
  Method: Gene