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WormBase Tree Display for Gene: WBGene00242320

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Name Class

WBGene00242320SMapS_parentSequenceOVOC_OM2_79
IdentityVersion2
NameCGC_nameOvo-pqn-87From_analysisInferred_from_orthology
Sequence_nameOVOC5511
Molecular_nameOVOC5511
OVOC5511.1
OVP00898
Public_nameOvo-pqn-87
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:33WBPerson3111EventImportedMAKER import
224 Jan 2014 16:01:33WBPerson4055Name_changeCGC_nameOvo-pqn-87
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpqn
RNASeq_FPKMWBls:000010118.4904From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
26.8503From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
WBls:0000104 (16)
WBls:000010712.048From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010852.6135From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
5.32612From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
73.1296From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
79.3847From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
WBls:000066427.9744From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
40.8931From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
53.8117From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
Ortholog (31)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: MATH/TRAF domain; MATH domain; and TRAF-like. Is an ortholog of C. elegans pqn-87.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC5511
Corresponding_transcriptOVOC5511.1
Other_sequence (44)
Experimental_infoExpression_clusterWBPaper00050764:Ov-L3D3_enriched
MethodGene