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WormBase Tree Display for Gene: WBGene00245688

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Name Class

WBGene00245688SMapS_parentSequenceOVOC_OM3_79
IdentityVersion1
NameSequence_nameOVOC8879
Molecular_nameOVOC8879
OVOC8879.1
OVP14223
Public_nameOVOC8879
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:34WBPerson3111EventImportedMAKER import
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00001015.58927From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
5.71446From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
WBls:00001040.776015From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.SRP056861.SRX978162
10.1317From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978164
1.32314From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978157
16.0854From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978161
2.74619From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978159
3.60866From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450842
3.94656From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529045
4.57529From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978156
4.9584From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450841
5.05324From_analysisRNASeq.ovolvulus.WBls:0000104.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450840
5.73625From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.ERP001350.ERX200394
5.90743From_analysisRNASeq.ovolvulus.WBls:0000104.control_mean
6.502From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978160
7.38993From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529044
7.64533From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978163
8.13333From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978158
WBls:00001075.57059From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:00001084.55286From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
6.18782From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
6.23821From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
7.97396From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
WBls:00006645.60796From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
6.41077From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
7.21358From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
GO_annotation00259633
00259634
00259635
OrthologWBGene00164116Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00035864Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00226973Brugia malayiFrom_analysisWormBase-Compara
WBGene00021758Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00124864Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00131846Caenorhabditis japonicaFrom_analysisWormBase-Compara
CBOVI.g4884Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g5185Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g13015Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP31.g2549Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g16264Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g4412Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g2712Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g10731Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00386.g10120Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-Y50D7A.10Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g16740Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_06040.g35973Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_23632Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_011781Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g03709Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g5804Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30326300Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00065379Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrIII_pilon.g6744Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00260957Strongyloides rattiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable Arp2/3 complex binding activity and actin binding activity. Predicted to be involved in actin filament debranching. Is an ortholog of C. elegans Y50D7A.10.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC8879
Corresponding_CDS_historyOVOC8879:ov243
Corresponding_transcriptOVOC8879.1
Other_sequenceOden_isotig11008
Acan_isotig01849
Acan_isotig01851
Oden_isotig11010
JI170244.1
Acan_isotig01850
Oden_isotig11009
MethodGene