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WormBase Tree Display for Gene: WBGene00245977

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Name Class

WBGene00245977SMapS_parentSequenceOVOC_OM3_91
IdentityVersion2
NameCGC_nameOvo-unc-50From_analysisInferred_from_orthology
Sequence_nameOVOC9168
Molecular_nameOVOC9168
OVOC9168.1
OVP05749
Public_nameOvo-unc-50
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:34WBPerson3111EventImportedMAKER import
224 Jan 2014 16:01:34WBPerson4055Name_changeCGC_nameOvo-unc-50
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:000010114.4698From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
15.4457From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
WBls:00001040.998072From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450840
10.5906From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.ERP001350.ERX200394
12.7452From_analysisRNASeq.ovolvulus.WBls:0000104.control_mean
12.9359From_analysisRNASeq.ovolvulus.WBls:0000104.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978159
1.38868From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529044
1.49574From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450842
15.5179From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978158
19.6009From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978164
20.1514From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978161
21.3092From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978157
24.2965From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978160
25.8518From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978156
26.0215From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978163
2.75898From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.SRP056861.SRX978162
3.42326From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529045
4.83706From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450841
WBls:000010715.0304From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010815.3734From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
24.213From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
25.8775From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
31.3882From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
WBls:000066417.3194From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
19.7439From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
22.1683From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
OrthologWBGene00164234Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00042682Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00225887Brugia malayiFrom_analysisWormBase-Compara
WBGene00006785Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00120915Caenorhabditis japonicaFrom_analysisWormBase-Compara
CBOVI.g4328Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g7269Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g14954Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g9528Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g15238Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g2660Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g15888Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g3086Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g16029Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g14025Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g477Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cni-unc-50Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold628.g7394Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00332.g9568Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_13496Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_010499Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g08112Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g22480Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30119200Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00055729Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00204467Pristionchus pacificusFrom_analysisWormBase-Compara
chrIII_pilon.g8842Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00262643Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00288348Trichuris murisFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: UNC-50 and UNC-50 family. Is an ortholog of C. elegans unc-50. In C. elegans, unc-50 is involved in receptor localization to synapse and regulation of muscle contraction.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC9168
Corresponding_transcriptOVOC9168.1
Other_sequenceHG01471
DN152853.1
ACC39928_1
MCC00757_1
Tcol_isotig13677
JI211064.1
AS12038
Dviv_isotig13779
ASC11556_1
HG08416
HGC08627_1
Hbac_isotig04081
HG05147
CBC05290_1
ES561464.1
CR12389
AS11525
HGC02417_1
Dviv_isotig13782
MC01813
HGC12209_1
ASC03440_1
PPC07763_1
ACC00994_1
EX560400.1
TSC10828_1
Dviv_isotig13781
ES570451.1
Tcir_isotig06429
XI04519
RSC04144_1
EX552533.1
Hbac_isotig07256
Oden_isotig10343
JI466485.1
HBC28200_1
Acan_isotig09116
FG619621.1
CR01169
TSC10380_1
Dviv_isotig13780
XIC05042_1
HG05305
JI170874.1
CJC04265_1
CRC01927_1
HGC04896_1
BM517665.1
HG09146
FG348790.1
EX562048.1
RS09206
Oden_isotig10344
MethodGene